STRINGSTRING
UFO1_0233 UFO1_0233 UFO1_0234 UFO1_0234 UFO1_1381 UFO1_1381 UFO1_1382 UFO1_1382 UFO1_3053 UFO1_3053 UFO1_3054 UFO1_3054
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UFO1_0233KEGG: signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein; SMART: ATP-binding region ATPase domain protein. (533 aa)
UFO1_0234Response regulator receiver and unknown domain protein; KEGG: response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver. (224 aa)
UFO1_1381TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein; KEGG: signal transduction histidine kinase regulating citrate/malate metabolism; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein. (532 aa)
UFO1_1382Response regulator receiver and unknown domain protein; KEGG: response regulator of citrate/malate metabolism; PFAM: response regulator receiver; SMART: response regulator receiver. (226 aa)
UFO1_3053Response regulator receiver and unknown domain protein; KEGG: response regulator of citrate/malate metabolism; PFAM: response regulator receiver; SMART: response regulator receiver. (234 aa)
UFO1_3054KEGG: signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein. (536 aa)
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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