STRINGSTRING
UFO1_3331 UFO1_3331 UFO1_1054 UFO1_1054 UFO1_1398 UFO1_1398 UFO1_1399 UFO1_1399 UFO1_3332 UFO1_3332 UFO1_4294 UFO1_4294 UFO1_0260 UFO1_0260
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UFO1_3331KEGG: PTS system fructose subfamily transporter subunit IIC; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC. (357 aa)
UFO1_1054KEGG: PTS system transporter subunit IIB; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit. (105 aa)
UFO1_1398KEGG: PTS system fructose subfamily transporter subunit IIC; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC. (349 aa)
UFO1_1399KEGG: PTS system fructose-specific transporter subunit IIB; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit. (104 aa)
UFO1_3332KEGG: PTS system fructose-specific transporter subunit IIB; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit. (104 aa)
UFO1_4294KEGG: PTS system fructose subfamily transporter subunit IIC; TIGRFAM: PTS system, fructose subfamily, IIC subunit, PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system EIIC, phosphotransferase system lactose/cellobiose-specific IIB subunit. (460 aa)
UFO1_0260KEGG: fructose-like phosphotransferase enzyme IIB component 2; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit. (103 aa)
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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