STRINGSTRING
UFO1_1546 UFO1_1546 UFO1_1417 UFO1_1417 UFO1_1381 UFO1_1381 UFO1_1174 UFO1_1174 UFO1_1027 UFO1_1027 UFO1_0968 UFO1_0968 UFO1_0964 UFO1_0964 UFO1_0887 UFO1_0887 UFO1_0886 UFO1_0886 UFO1_0704 UFO1_0704 UFO1_0613 UFO1_0613 UFO1_0517 UFO1_0517 UFO1_0432 UFO1_0432 UFO1_0428 UFO1_0428 UFO1_0420 UFO1_0420 UFO1_0396 UFO1_0396 UFO1_0233 UFO1_0233 UFO1_0202 UFO1_0202 UFO1_0088 UFO1_0088 UFO1_0073 UFO1_0073 UFO1_0025 UFO1_0025 UFO1_0148 UFO1_0148 UFO1_0108 UFO1_0108 UFO1_0093 UFO1_0093 UFO1_4703 UFO1_4703 UFO1_4693 UFO1_4693 UFO1_4660 UFO1_4660 UFO1_4572 UFO1_4572 UFO1_4463 UFO1_4463 UFO1_4412 UFO1_4412 UFO1_4384 UFO1_4384 UFO1_4360 UFO1_4360 UFO1_4356 UFO1_4356 UFO1_4352 UFO1_4352 UFO1_4339 UFO1_4339 UFO1_4332 UFO1_4332 UFO1_3963 UFO1_3963 UFO1_3798 UFO1_3798 UFO1_3740 UFO1_3740 UFO1_3660 UFO1_3660 UFO1_3590 UFO1_3590 UFO1_3306 UFO1_3306 UFO1_3186 UFO1_3186 UFO1_3138 UFO1_3138 UFO1_3096 UFO1_3096 UFO1_3054 UFO1_3054 UFO1_2969 UFO1_2969 UFO1_2290 UFO1_2290 UFO1_2115 UFO1_2115 UFO1_1639 UFO1_1639 UFO1_1572 UFO1_1572
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UFO1_1546TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase dimerization and phosphoacceptor region; KEGG: two-component sensor histidine kinase; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein. (356 aa)
UFO1_1417Putative sigma54 specific transcriptional regulator with PAS/PAC sensor; KEGG: PAS domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein, PAS fold-4 domain protein, amino acid-binding ACT domain-containing protein; SMART: AAA ATPase, PAS domain containing protein. (517 aa)
UFO1_1381TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein; KEGG: signal transduction histidine kinase regulating citrate/malate metabolism; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein. (532 aa)
UFO1_1174Putative sigma54 specific transcriptional regulator with PAS/PAC sensor; KEGG: putative PAS/PAC sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, amino acid-binding ACT domain-containing protein, PAS fold domain protein; SMART: AAA ATPase. (532 aa)
UFO1_1027TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein; KEGG: multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein, PAC repeat-containing protein. (677 aa)
UFO1_0968TIGRFAM: PAS sensor protein, metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; KEGG: PAS/PAC sensor protein; SMART: metal-dependent phosphohydrolase HD region. (356 aa)
UFO1_0964Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein, PAS fold domain protein; KEGG: multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein. (591 aa)
UFO1_0887Putative sigma54 specific transcriptional regulator with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; KEGG: PAS domain-containing protein; SMART: AAA ATPase, PAS domain containing protein. (539 aa)
UFO1_0886Signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, Cache domain protein, histidine kinase A domain protein, PAS fold-4 domain protein; KEGG: membrane signaling protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein. (775 aa)
UFO1_0704TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: sensor diguanylate cyclase, PAS domain-containing; SMART: GGDEF domain containing protein, PAS domain containing protein. (300 aa)
UFO1_0613TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, CHASE domain protein, PAS domain containing protein; KEGG: PAS/PAC sensor-containing diguanylate cyclase; SMART: GGDEF domain containing protein, metal-dependent phosphohydrolase HD region, CHASE domain protein. (757 aa)
UFO1_0517Putative sigma54 specific transcriptional regulator with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, phosphoryl transfer system HPr, PAS fold domain protein; KEGG: sigma-54-dependent transcriptional activator (nifa/ntrc family); SMART: AAA ATPase, PAS domain containing protein. (680 aa)
UFO1_0432TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein; KEGG: membrane signaling protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein. (480 aa)
UFO1_0428TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, PAS domain containing protein; KEGG: hypothetical protein; SMART: GGDEF domain containing protein, PAS domain containing protein, PAC repeat-containing protein. (436 aa)
UFO1_0420KEGG: CitA, signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein. (551 aa)
UFO1_0396TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; KEGG: signal transduction histidine kinase nitrogen specific-like protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein. (348 aa)
UFO1_0233KEGG: signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein; SMART: ATP-binding region ATPase domain protein. (533 aa)
UFO1_0202Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold domain protein; KEGG: sensory histidine kinase AtoS; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein. (614 aa)
UFO1_0088PAS modulated sigma54 specific transcriptional regulator, Fis family; KEGG: hypothetical protein; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type; SMART: AAA ATPase, PAS domain containing protein. (454 aa)
UFO1_0073PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-4 domain protein, histidine kinase A domain protein; KEGG: membrane signaling protein; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein. (512 aa)
UFO1_0025Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-3 domain protein, histidine kinase A domain protein; KEGG: membrane signaling protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein. (556 aa)
UFO1_0148Proprionate catabolism activator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, Propionate catabolism activator domain-containing protein, helix-turn-helix Fis-type, PAS domain containing protein; KEGG: Fis family transcriptional regulator; SMART: AAA ATPase, PAS domain containing protein. (625 aa)
UFO1_0108TIGRFAM: PAS sensor protein; PFAM: protein phosphatase 2C domain protein, histidine kinase HAMP region domain protein; KEGG: methyl-accepting chemotaxis sensory transducer; SMART: histidine kinase HAMP region domain protein, PAC repeat-containing protein, protein phosphatase 2C domain protein, PAS domain containing protein. (740 aa)
UFO1_0093Proprionate catabolism activator, Fis family; KEGG: hypothetical protein; PFAM: sigma-54 factor interaction domain-containing protein, Propionate catabolism activator domain-containing protein, PAS domain containing protein, helix-turn-helix Fis-type; SMART: AAA ATPase, PAS domain containing protein. (633 aa)
UFO1_4703Putative sigma54 specific transcriptional regulator with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, PAS fold domain protein, amino acid-binding ACT domain-containing protein; KEGG: PAS domain-containing protein; SMART: AAA ATPase, PAS domain containing protein. (516 aa)
UFO1_4693Diguanylate cyclase with PAS/PAC and Cache sensor; TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, histidine kinase HAMP region domain protein, Cache domain protein; KEGG: PAS/PAC sensor-containing diguanylate cyclase; SMART: GGDEF domain containing protein, histidine kinase HAMP region domain protein. (695 aa)
UFO1_4660Proprionate catabolism activator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, Propionate catabolism activator domain-containing protein, helix-turn-helix Fis-type; KEGG: sigma-54 dependent transcriptional regulator; SMART: AAA ATPase, PAS domain containing protein. (637 aa)
UFO1_4572Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region, histidine kinase A domain protein, ATP-binding region ATPase domain protein; KEGG: membrane signaling protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein. (537 aa)
UFO1_4463Signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold domain protein; KEGG: membrane signaling protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein. (519 aa)
UFO1_4412PFAM: Protein of unknown function DUF1057; KEGG: PAS fold domain protein. (112 aa)
UFO1_4384Diguanylate cyclase with PAS/PAC and GAF sensor; TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: PAS/PAC sensor-containing diguanylate cyclase; SMART: GGDEF domain containing protein, GAF domain protein, PAS domain containing protein. (871 aa)
UFO1_4360SMART: metal-dependent phosphohydrolase HD region; KEGG: putative PAS/PAC sensor protein. (332 aa)
UFO1_4356Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: EAL domain-containing protein, GGDEF domain containing protein; KEGG: PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; SMART: EAL domain-containing protein, PAS domain containing protein, PAC repeat-containing protein, GGDEF domain containing protein. (682 aa)
UFO1_4352KEGG: PAS domain-containing sensor histidine kinase response regulator heme-binding site; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver, Hpt domain protein, PAS domain containing protein; SMART: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein. (851 aa)
UFO1_4339PAS modulated sigma54 specific transcriptional regulator, Fis family; KEGG: putative sigma-54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type; SMART: AAA ATPase, PAS domain containing protein. (567 aa)
UFO1_4332Diguanylate cyclase with PAS/PAC and GAF sensor; TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, response regulator receiver; KEGG: PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase; SMART: GGDEF domain containing protein, response regulator receiver, GAF domain protein, PAC repeat-containing protein, PAS domain containing protein. (599 aa)
UFO1_3963Putative sigma54 specific transcriptional regulator with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, PAS fold domain protein, amino acid-binding ACT domain-containing protein; KEGG: PAS modulated sigma-54 specific Fis family transcriptional regulator; SMART: AAA ATPase, PAS domain containing protein. (521 aa)
UFO1_3798Sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type; KEGG: sigma-54 specific transcriptional regulator; SMART: AAA ATPase, PAS domain containing protein. (666 aa)
UFO1_3740Proprionate catabolism activator, Fis family; KEGG: Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein, PAS domain containing protein, Propionate catabolism activator domain-containing protein, helix-turn-helix Fis-type; SMART: AAA ATPase, PAS domain containing protein. (634 aa)
UFO1_3660Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-3 domain protein, histidine kinase A domain protein; KEGG: membrane signaling protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein, PAC repeat-containing protein. (552 aa)
UFO1_3590PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, PAS fold domain protein, helix-turn-helix Fis-type; KEGG: PAS modulated sigma54 specific transcriptional regulator; SMART: AAA ATPase, PAS domain containing protein. (601 aa)
UFO1_3306PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type, CBS domain containing protein, PAS fold domain protein; KEGG: PAS domain-containing protein; SMART: AAA ATPase, CBS domain containing protein, PAS domain containing protein. (697 aa)
UFO1_3186PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, PAS fold domain protein, helix-turn-helix Fis-type; KEGG: sigma-54 dependent trancsriptional regulator; SMART: AAA ATPase, PAS domain containing protein. (490 aa)
UFO1_3138TIGRFAM: PAS sensor protein; PFAM: protein phosphatase 2C domain protein; KEGG: hypothetical protein; SMART: protein phosphatase 2C domain protein, PAS domain containing protein. (351 aa)
UFO1_3096PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, PAS fold domain protein, helix-turn-helix Fis-type; KEGG: sigma L-dependent transcriptional regulator; SMART: AAA ATPase, PAS domain containing protein. (473 aa)
UFO1_3054KEGG: signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein. (536 aa)
UFO1_2969TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein; KEGG: multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein. (490 aa)
UFO1_2290TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, Cache domain protein, histidine kinase HAMP region domain protein, PAS fold-3 domain protein; KEGG: signal transduction histidine kinase; SMART: GGDEF domain containing protein, PAS domain containing protein, PAC repeat-containing protein. (667 aa)
UFO1_2115Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold-3 domain protein, histidine kinase A domain protein; KEGG: PAS domain S-box; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein. (556 aa)
UFO1_1639PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type, PAS fold-4 domain protein; KEGG: PAS modulated Fis family sigma-54-specific transcriptional regulator; SMART: AAA ATPase. (497 aa)
UFO1_1572PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein, histidine kinase A domain protein; KEGG: sensory histidine kinase AtoS; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein. (379 aa)
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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