STRINGSTRING
UFO1_0840 UFO1_0840 UFO1_2556 UFO1_2556 UFO1_3821 UFO1_3821 UFO1_4352 UFO1_4352
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UFO1_0840CheA signal transduction histidine kinase; KEGG: chemotaxis protein histidine kinase-like protein; PFAM: ATP-binding region ATPase domain protein, Signal transducing histidine kinase homodimeric, P2 response regulator binding domain protein, CheW domain protein, Hpt domain protein; SMART: CheW domain protein, ATP-binding region ATPase domain protein, Hpt domain protein. (674 aa)
UFO1_2556KEGG: CheA signal transduction histidine kinase; PFAM: CheW domain protein, Hpt domain protein, Signal transducing histidine kinase homodimeric, ATP-binding region ATPase domain protein, P2 response regulator binding domain protein; SMART: CheW domain protein, ATP-binding region ATPase domain protein, Hpt domain protein. (677 aa)
UFO1_3821KEGG: cheA2, chemotaxis protein histidine kinase CheA2; PFAM: CheW domain protein, Hpt domain protein, ATP-binding region ATPase domain protein, response regulator receiver, Signal transducing histidine kinase homodimeric; SMART: Hpt domain protein, ATP-binding region ATPase domain protein, CheW domain protein, response regulator receiver. (982 aa)
UFO1_4352KEGG: PAS domain-containing sensor histidine kinase response regulator heme-binding site; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver, Hpt domain protein, PAS domain containing protein; SMART: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein. (851 aa)
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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