STRINGSTRING
UFO1_0264 UFO1_0264 UFO1_1000 UFO1_1000 UFO1_1062 UFO1_1062 UFO1_1353 UFO1_1353 UFO1_2346 UFO1_2346 UFO1_3586 UFO1_3586 UFO1_4077 UFO1_4077
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UFO1_0264SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein. (1174 aa)
UFO1_10003-methyl-2-oxobutanoate dehydrogenase (ferredoxin); KEGG: pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. (356 aa)
UFO1_1062SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate ferredoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein. (1181 aa)
UFO1_1353SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate ferredoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, thiamine pyrophosphate TPP-binding domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein. (1180 aa)
UFO1_2346KEGG: 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) subunit alpha; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Transketolase domain-containing protein. (356 aa)
UFO1_35863-methyl-2-oxobutanoate dehydrogenase (ferredoxin); KEGG: pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Transketolase domain-containing protein. (355 aa)
UFO1_40771-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase central region, Transketolase domain-containing protein; KEGG: transketolase, C-terminal subunit; SMART: Transketolase central region. (311 aa)
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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