STRINGSTRING
UFO1_0264 UFO1_0264 UFO1_0827 UFO1_0827 UFO1_0959 UFO1_0959 UFO1_0960 UFO1_0960 fumC fumC UFO1_0999 UFO1_0999 UFO1_1000 UFO1_1000 UFO1_1001 UFO1_1001 UFO1_1002 UFO1_1002 UFO1_1062 UFO1_1062 UFO1_1353 UFO1_1353 UFO1_1744 UFO1_1744 UFO1_2006 UFO1_2006 pckA pckA UFO1_2344 UFO1_2344 UFO1_2345 UFO1_2345 UFO1_2346 UFO1_2346 UFO1_2347 UFO1_2347 pckA-2 pckA-2 UFO1_2963 UFO1_2963 UFO1_3045 UFO1_3045 UFO1_3062 UFO1_3062 UFO1_3063 UFO1_3063 UFO1_3064 UFO1_3064 UFO1_3065 UFO1_3065 UFO1_3066 UFO1_3066 UFO1_3231 UFO1_3231 UFO1_3232 UFO1_3232 UFO1_3233 UFO1_3233 UFO1_3234 UFO1_3234 UFO1_3584 UFO1_3584 UFO1_3585 UFO1_3585 UFO1_3586 UFO1_3586 UFO1_3587 UFO1_3587 mdh mdh
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
UFO1_0264SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein. (1174 aa)
UFO1_0827KEGG: aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain-containing protein. (640 aa)
UFO1_0959TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; KEGG: 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein. (287 aa)
UFO1_0960TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; KEGG: pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase. (581 aa)
fumCFumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (461 aa)
UFO1_0999PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: 4Fe-4S ferredoxin. (71 aa)
UFO1_10003-methyl-2-oxobutanoate dehydrogenase (ferredoxin); KEGG: pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein. (356 aa)
UFO1_10012-oxoglutarate synthase; KEGG: thiamine pyrophosphate protein domain-containing protein; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein. (250 aa)
UFO1_1002KEGG: pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase. (176 aa)
UFO1_1062SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate ferredoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein. (1181 aa)
UFO1_1353SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: pyruvate ferredoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, thiamine pyrophosphate TPP-binding domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein. (1180 aa)
UFO1_17443-isopropylmalate dehydratase; KEGG: aconitase A; PFAM: aconitate hydratase domain-containing protein. (798 aa)
UFO1_2006TIGRFAM: dihydrolipoamide dehydrogenase; KEGG: lpd, dihydrolipoyl dehydrogenase Lpd; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase. (468 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (525 aa)
UFO1_2344KEGG: subunit of oxidoreductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase. (181 aa)
UFO1_23452-oxoglutarate synthase; KEGG: 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) subunit beta; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein. (250 aa)
UFO1_2346KEGG: 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) subunit alpha; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Transketolase domain-containing protein. (356 aa)
UFO1_2347PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: 4Fe-4S ferredoxin. (68 aa)
pckA-2Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. (521 aa)
UFO1_2963TIGRFAM: succinate CoA transferase; KEGG: succinate CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase C-terminal domain, acetyl-CoA hydrolase/transferase. (501 aa)
UFO1_3045TIGRFAM: succinate CoA transferase; KEGG: succinate CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase C-terminal domain, acetyl-CoA hydrolase/transferase. (501 aa)
UFO1_3062TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: sdhB, putative succinate dehydrogenase iron-sulfur subunit; PFAM: Succinate dehydogenase/fumarate reductase N-terminal, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein. (252 aa)
UFO1_3063TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein, Fumarate reductase/succinate dehydrogenase flavoprotein-like protein. (583 aa)
UFO1_3064PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: sdhC, hypothetical protein. (204 aa)
UFO1_3065TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; KEGG: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region. (185 aa)
UFO1_3066TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region. (281 aa)
UFO1_3231KEGG: 2-oxoglutarate synthase; PFAM: Pyruvate/ketoisovalerate oxidoreductase. (175 aa)
UFO1_3232KEGG: 2-oxoglutarate synthase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein. (272 aa)
UFO1_32332-oxoglutarate synthase; KEGG: PorA, pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Transketolase domain-containing protein. (375 aa)
UFO1_3234PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: ferredoxin. (60 aa)
UFO1_3584KEGG: subunit of oxidoreductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase. (182 aa)
UFO1_35852-oxoglutarate synthase; KEGG: 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) subunit beta; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein. (247 aa)
UFO1_35863-methyl-2-oxobutanoate dehydrogenase (ferredoxin); KEGG: pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Transketolase domain-containing protein. (355 aa)
UFO1_3587PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: 2-oxoglutarate ferredoxin oxidoreductase subunit delta. (67 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (312 aa)
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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