(10 nodes) Mixed, incl. Xylan degradation, and Prolyl oligopeptidase family network (Actinophytocola xinjiangensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OLF14029.1	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
	OLF14399.1	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
	OLF14407.1	Poly(3-hydroxybutyrate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
	OLF13124.1	Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
	OLF12041.1	Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
	OLF11484.1	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	OLF10578.1	Poly(3-hydroxybutyrate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
	OLF09845.1	alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
	OLF09692.1	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (478 aa)
	OLF08170.1	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)

Your Current Organism:

Actinophytocola xinjiangensis

NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OLF08170.1	OLF09845.1	BLA60_25275	BLA60_18005	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
OLF08170.1	OLF10578.1	BLA60_25275	BLA60_15480	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Poly(3-hydroxybutyrate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.808
OLF08170.1	OLF11484.1	BLA60_25275	BLA60_10965	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.405
OLF08170.1	OLF12041.1	BLA60_25275	BLA60_08420	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.765
OLF08170.1	OLF13124.1	BLA60_25275	BLA60_07810	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.753
OLF08170.1	OLF14029.1	BLA60_25275	BLA60_02300	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
OLF08170.1	OLF14399.1	BLA60_25275	BLA60_04555	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
OLF08170.1	OLF14407.1	BLA60_25275	BLA60_04610	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Poly(3-hydroxybutyrate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.875
OLF09692.1	OLF09845.1	BLA60_18035	BLA60_18005	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955
OLF09692.1	OLF10578.1	BLA60_18035	BLA60_15480	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Poly(3-hydroxybutyrate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.634
OLF09692.1	OLF11484.1	BLA60_18035	BLA60_10965	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.840
OLF09692.1	OLF12041.1	BLA60_18035	BLA60_08420	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
OLF09692.1	OLF13124.1	BLA60_18035	BLA60_07810	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730
OLF09692.1	OLF14029.1	BLA60_18035	BLA60_02300	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
OLF09692.1	OLF14399.1	BLA60_18035	BLA60_04555	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
OLF09692.1	OLF14407.1	BLA60_18035	BLA60_04610	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Poly(3-hydroxybutyrate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
OLF09845.1	OLF08170.1	BLA60_18005	BLA60_25275	alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
OLF09845.1	OLF09692.1	BLA60_18005	BLA60_18035	alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.955
OLF09845.1	OLF10578.1	BLA60_18005	BLA60_15480	alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Poly(3-hydroxybutyrate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
OLF09845.1	OLF11484.1	BLA60_18005	BLA60_10965	alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.877

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