(5 nodes) Protein of unknown function (DUF1702), and Biosynthesis of enediyne antibiotics network (Actinophytocola xinjiangensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OLF12936.1	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
	OLF12937.1	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
	OLF12938.1	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (656 aa)
	OLF12939.1	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
	OLF12940.1	Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)

Your Current Organism:

Actinophytocola xinjiangensis

NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OLF12936.1	OLF12937.1	BLA60_06700	BLA60_06705	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
OLF12936.1	OLF12938.1	BLA60_06700	BLA60_06710	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
OLF12936.1	OLF12939.1	BLA60_06700	BLA60_06715	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
OLF12936.1	OLF12940.1	BLA60_06700	BLA60_06720	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
OLF12937.1	OLF12936.1	BLA60_06705	BLA60_06700	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.933
OLF12937.1	OLF12938.1	BLA60_06705	BLA60_06710	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
OLF12937.1	OLF12939.1	BLA60_06705	BLA60_06715	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
OLF12937.1	OLF12940.1	BLA60_06705	BLA60_06720	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
OLF12938.1	OLF12936.1	BLA60_06710	BLA60_06700	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
OLF12938.1	OLF12937.1	BLA60_06710	BLA60_06705	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
OLF12938.1	OLF12939.1	BLA60_06710	BLA60_06715	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
OLF12938.1	OLF12940.1	BLA60_06710	BLA60_06720	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
OLF12939.1	OLF12936.1	BLA60_06715	BLA60_06700	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
OLF12939.1	OLF12937.1	BLA60_06715	BLA60_06705	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
OLF12939.1	OLF12938.1	BLA60_06715	BLA60_06710	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
OLF12939.1	OLF12940.1	BLA60_06715	BLA60_06720	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
OLF12940.1	OLF12936.1	BLA60_06720	BLA60_06700	Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
OLF12940.1	OLF12937.1	BLA60_06720	BLA60_06705	Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
OLF12940.1	OLF12938.1	BLA60_06720	BLA60_06710	Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.	RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
OLF12940.1	OLF12939.1	BLA60_06720	BLA60_06715	Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.	Enediyne biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968

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