STRINGSTRING
Hmuk_1030 Hmuk_1030 Hmuk_1035 Hmuk_1035 Hmuk_1907 Hmuk_1907 Hmuk_2060 Hmuk_2060 Hmuk_2261 Hmuk_2261 Hmuk_2734 Hmuk_2734
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Hmuk_1030Helicase; KEGG: nph:NP5150A helicase. (150 aa)
Hmuk_1035PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; KEGG: nph:NP5144A helicase. (697 aa)
Hmuk_1907PFAM: phosphoesterase RecJ domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: RNA binding S1 domain protein; KEGG: hma:rrnAC1441 putative exonuclease RecJ-like. (636 aa)
Hmuk_2060SMART: regulatory protein Crp; KEGG: hal:VNG1548C hypothetical protein. (268 aa)
Hmuk_2261PFAM: phosphoribosyltransferase; KEGG: hma:rrnAC0927 orotate phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. (212 aa)
Hmuk_2734PFAM: Protein of unknown function DUF293; Helix- turn-helix type 11 domain protein; KEGG: hma:rrnAC0451 hypothetical protein. (177 aa)
Your Current Organism:
Halomicrobium mukohataei
NCBI taxonomy Id: 485914
Other names: H. mukohataei DSM 12286, Halomicrobium mukohataei DSM 12286, Halomicrobium mukohataei str. DSM 12286, Halomicrobium mukohataei strain DSM 12286
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