STRINGSTRING
Phep_1840 Phep_1840 Phep_1710 Phep_1710 Phep_1581 Phep_1581 Phep_1580 Phep_1580 Phep_1579 Phep_1579 Phep_2687 Phep_2687 Phep_2692 Phep_2692 Phep_2776 Phep_2776 Phep_3754 Phep_3754 Phep_2787 Phep_2787 Phep_2788 Phep_2788 Phep_2792 Phep_2792 Phep_2795 Phep_2795 Phep_2818 Phep_2818 Phep_2888 Phep_2888 Phep_2604 Phep_2604 Phep_3223 Phep_3223 Phep_3465 Phep_3465 Phep_4108 Phep_4108 Phep_3977 Phep_3977 Phep_3798 Phep_3798 Phep_3783 Phep_3783 Phep_1313 Phep_1313 Phep_1158 Phep_1158 Phep_1157 Phep_1157 Phep_1155 Phep_1155 Phep_1149 Phep_1149 Phep_0962 Phep_0962 cslB cslB Phep_0772 Phep_0772 Phep_0717 Phep_0717 Phep_3113 Phep_3113 Phep_1970 Phep_1970
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Phep_1840Conserved hypothetical protein. (538 aa)
Phep_1710PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (518 aa)
Phep_1581PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (489 aa)
Phep_1580Endopygalactorunase; Belongs to the glycosyl hydrolase 28 family. (246 aa)
Phep_1579PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (492 aa)
Phep_2687Conserved hypothetical protein. (508 aa)
Phep_2692Conserved hypothetical protein. (503 aa)
Phep_2776Hypothetical protein. (838 aa)
Phep_3754Endopygalactorunase. (983 aa)
Phep_2787Hypothetical protein. (1037 aa)
Phep_2788Conserved hypothetical protein. (541 aa)
Phep_2792Hypothetical protein; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type. (843 aa)
Phep_2795Conserved hypothetical protein. (551 aa)
Phep_2818PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (542 aa)
Phep_2888PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (530 aa)
Phep_2604PFAM: Fibronectin type III domain. (1302 aa)
Phep_3223Hypothetical protein. (462 aa)
Phep_3465Hypothetical protein. (551 aa)
Phep_4108Parallel beta-helix repeat protein. (721 aa)
Phep_3977PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (543 aa)
Phep_3798Filamentous hemagglutinin outer membrane protein; PFAM: Bacterial Ig-like domain (group 2). (1526 aa)
Phep_3783Hypothetical protein; Belongs to the glycosyl hydrolase 28 family. (439 aa)
Phep_1313Hypothetical protein. (451 aa)
Phep_1158PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (554 aa)
Phep_1157PFAM: Pectinesterase. (322 aa)
Phep_1155Fibronectin type III domain protein. (516 aa)
Phep_1149PFAM: Pectinesterase. (345 aa)
Phep_0962Hypothetical protein. (410 aa)
cslBHypothetical protein; Cleaves the glycosaminoglycan, dermatan sulfate. (506 aa)
Phep_0772Hypothetical protein. (1023 aa)
Phep_0717PFAM: Glycosyl hydrolases family 28; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; Belongs to the glycosyl hydrolase 28 family. (559 aa)
Phep_3113PFAM: Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family. (524 aa)
Phep_1970Hypothetical protein. (459 aa)
Your Current Organism:
Pedobacter heparinus
NCBI taxonomy Id: 485917
Other names: P. heparinus DSM 2366, Pedobacter heparinus DSM 2366, Pedobacter heparinus IFO 12017, Pedobacter heparinus LMG 10339, Pedobacter heparinus str. DSM 2366, Pedobacter heparinus strain DSM 2366
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