STRINGSTRING
Phep_0371 Phep_0371 Phep_0187 Phep_0187 Phep_0085 Phep_0085 Phep_1482 Phep_1482 Phep_1479 Phep_1479 Phep_1481 Phep_1481 Phep_0868 Phep_0868
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Phep_0371Von Willebrand factor type A. (365 aa)
Phep_0187PFAM: von Willebrand factor type A domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type. (613 aa)
Phep_0085PFAM: TROVE domain. (526 aa)
Phep_1482PFAM: von Willebrand factor type A domain. (344 aa)
Phep_1479Conserved hypothetical protein; PFAM: Protein of unknown function DUF58. (291 aa)
Phep_1481PFAM: von Willebrand factor type A domain. (332 aa)
Phep_0868Von Willebrand factor type A; PFAM: Protein of unknown function DUF58. (322 aa)
Your Current Organism:
Pedobacter heparinus
NCBI taxonomy Id: 485917
Other names: P. heparinus DSM 2366, Pedobacter heparinus DSM 2366, Pedobacter heparinus IFO 12017, Pedobacter heparinus LMG 10339, Pedobacter heparinus str. DSM 2366, Pedobacter heparinus strain DSM 2366
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