81 items (Penicillium freii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACN42_g11938	Integrase catalytic domain-containing protein. (114 aa)
	ACN42_g11892	Uncharacterized protein. (195 aa)
	ACN42_g11987	CCHC-type domain-containing protein. (365 aa)
	ACN42_g903	Uncharacterized protein. (837 aa)
	ACN42_g639	Uncharacterized protein; Belongs to the peptidase C19 family. (1110 aa)
	ACN42_g647	Uncharacterized protein. (822 aa)
	ACN42_g551	ERCC4 domain-containing protein. (973 aa)
	ACN42_g375	TPR_REGION domain-containing protein. (844 aa)
	ACN42_g223	CBFD_NFYB_HMF domain-containing protein. (187 aa)
	ACN42_g9684	Uncharacterized protein. (106 aa)
	ACN42_g6916	Uncharacterized protein. (78 aa)
	ACN42_g4626	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1325 aa)
	ACN42_g4268	RING-type domain-containing protein. (117 aa)
	ACN42_g3232	Uncharacterized protein. (1012 aa)
	ACN42_g3162	RT_RNaseH domain-containing protein. (134 aa)
	ACN42_g2898	Uncharacterized protein. (146 aa)
	ACN42_g2541	Uncharacterized protein. (449 aa)
	ACN42_g1967	Uncharacterized protein. (378 aa)
	ACN42_g154	Uncharacterized protein. (567 aa)
	ACN42_g153	Uncharacterized protein. (169 aa)
	ACN42_g1666	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1737 aa)
	ACN42_g11918	Uncharacterized protein. (717 aa)
	ACN42_g859	Integrase_H2C2 domain-containing protein. (226 aa)
	ACN42_g1029	Uncharacterized protein. (1110 aa)
	ACN42_g1189	Uncharacterized protein. (249 aa)
	ACN42_g1408	RPOL4c domain-containing protein. (148 aa)
	ACN42_g1373	RING-type domain-containing protein. (370 aa)
	ACN42_g3930	Uncharacterized protein. (184 aa)
	ACN42_g3906	Uncharacterized protein. (318 aa)
	ACN42_g4074	Uncharacterized protein. (155 aa)
	ACN42_g4216	Uncharacterized protein. (118 aa)
	ACN42_g4438	Uncharacterized protein. (424 aa)
	ACN42_g4675	Uncharacterized protein. (153 aa)
	ACN42_g4796	Reverse transcriptase Ty1/copia-type domain-containing protein. (423 aa)
	ACN42_g5296	Helicase ATP-binding domain-containing protein. (795 aa)
	ACN42_g5507	BSD domain-containing protein. (643 aa)
	ACN42_g5900	WD_REPEATS_REGION domain-containing protein. (491 aa)
	ACN42_g6600	CYCLIN domain-containing protein; Belongs to the cyclin family. (428 aa)
	ACN42_g6503	Uncharacterized protein. (250 aa)
	ACN42_g6815	Uncharacterized protein. (135 aa)
	ACN42_g7738	Uncharacterized protein. (372 aa)
	ACN42_g7779	Uncharacterized protein. (388 aa)
	ACN42_g8210	Uncharacterized protein. (72 aa)
	ACN42_g8274	Uncharacterized protein. (159 aa)
	ACN42_g8234	RRM domain-containing protein. (152 aa)
	ACN42_g8264	RPOL9 domain-containing protein. (136 aa)
	ACN42_g2699	Ubiquitin-like domain-containing protein. (172 aa)
	ACN42_g1800	Uncharacterized protein. (234 aa)
	ACN42_g11776	Uncharacterized protein. (165 aa)
	ACN42_g10307	RPOLD domain-containing protein. (335 aa)
	ACN42_g9987	Zds_C domain-containing protein. (835 aa)
	ACN42_g9706	RNA_pol_L_2 domain-containing protein. (163 aa)
	ACN42_g9495	Uncharacterized protein. (306 aa)
	ACN42_g8913	Uncharacterized protein. (507 aa)
	ACN42_g7171	Uncharacterized protein. (107 aa)
	ACN42_g4846	USP domain-containing protein; Belongs to the peptidase C19 family. (1289 aa)
	ACN42_g4719	Uncharacterized protein. (379 aa)
	ACN42_g4220	CULLIN_2 domain-containing protein; Belongs to the cullin family. (873 aa)
	ACN42_g4250	Uncharacterized protein. (474 aa)
	ACN42_g3806	Uncharacterized protein. (529 aa)
	ACN42_g3648	Uncharacterized protein. (1113 aa)
	ACN42_g3507	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	ACN42_g2762	AAA domain-containing protein. (1186 aa)
	ACN42_g2519	Uncharacterized protein. (1116 aa)
	ACN42_g1190	Uncharacterized protein. (819 aa)
	ACN42_g8275	Uncharacterized protein. (125 aa)
	ACN42_g8618	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (404 aa)
	ACN42_g8724	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
	ACN42_g8833	Aquarius_N domain-containing protein. (146 aa)
	ACN42_g8719	Uncharacterized protein. (74 aa)
	ACN42_g8830	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (480 aa)
	ACN42_g8832	Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome. (1273 aa)
	ACN42_g9108	CPSF_A domain-containing protein. (1143 aa)
	ACN42_g9187	Uncharacterized protein. (348 aa)
	ACN42_g10694	UmuC domain-containing protein. (615 aa)
	ACN42_g10982	Uncharacterized protein. (782 aa)
	ACN42_g11171	Uncharacterized protein. (259 aa)
	ubi	Polyubiquitin. (305 aa)
	ACN42_g11716	Uncharacterized protein. (118 aa)
	ACN42_g11785	Uncharacterized protein. (108 aa)
	ACN42_g11838	Uncharacterized protein. (213 aa)

Your Current Organism:

Penicillium freii

NCBI taxonomy Id: 48697
Other names: CBS 476.84, IMI 285515, P. freii

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN42_g1029	ACN42_g4250	A0A101MSY8	A0A117NPT7	Uncharacterized protein.	Uncharacterized protein.	0.408
ACN42_g10307	ACN42_g1190	A0A117NKZ2	A0A117NRS5	RPOLD domain-containing protein.	Uncharacterized protein.	0.878
ACN42_g10307	ACN42_g1373	A0A117NKZ2	A0A101MS11	RPOLD domain-containing protein.	RING-type domain-containing protein.	0.988
ACN42_g10307	ACN42_g1408	A0A117NKZ2	A0A101MS29	RPOLD domain-containing protein.	RPOL4c domain-containing protein.	0.999
ACN42_g10307	ACN42_g153	A0A117NKZ2	A0A124GTM9	RPOLD domain-containing protein.	Uncharacterized protein.	0.999
ACN42_g10307	ACN42_g154	A0A117NKZ2	A0A124GTM4	RPOLD domain-containing protein.	Uncharacterized protein.	0.980
ACN42_g10307	ACN42_g1666	A0A117NKZ2	A0A101MRM0	RPOLD domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
ACN42_g10307	ACN42_g1800	A0A117NKZ2	A0A124GSR5	RPOLD domain-containing protein.	Uncharacterized protein.	0.999
ACN42_g10307	ACN42_g223	A0A117NKZ2	A0A117NSZ4	RPOLD domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.409
ACN42_g10307	ACN42_g2519	A0A117NKZ2	A0A117NQV6	RPOLD domain-containing protein.	Uncharacterized protein.	0.952
ACN42_g10307	ACN42_g2699	A0A117NKZ2	A0A124GSG9	RPOLD domain-containing protein.	Ubiquitin-like domain-containing protein.	0.702
ACN42_g10307	ACN42_g3232	A0A117NKZ2	A0A101MNM3	RPOLD domain-containing protein.	Uncharacterized protein.	0.952
ACN42_g10307	ACN42_g3507	A0A117NKZ2	A0A117NQA1	RPOLD domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
ACN42_g10307	ACN42_g375	A0A117NKZ2	A0A117NSP2	RPOLD domain-containing protein.	TPR_REGION domain-containing protein.	0.555
ACN42_g10307	ACN42_g4220	A0A117NKZ2	A0A117NPS6	RPOLD domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.861
ACN42_g10307	ACN42_g4250	A0A117NKZ2	A0A117NPT7	RPOLD domain-containing protein.	Uncharacterized protein.	0.532
ACN42_g10307	ACN42_g4268	A0A117NKZ2	A0A124GRZ6	RPOLD domain-containing protein.	RING-type domain-containing protein.	0.893
ACN42_g10307	ACN42_g4626	A0A117NKZ2	A0A124GRW0	RPOLD domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
ACN42_g10307	ACN42_g4675	A0A117NKZ2	A0A101MKU3	RPOLD domain-containing protein.	Uncharacterized protein.	0.999
ACN42_g10307	ACN42_g4719	A0A117NKZ2	A0A117NPJ2	RPOLD domain-containing protein.	Uncharacterized protein.	0.980