48 items (Penicillium freii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACN42_g154	Uncharacterized protein. (567 aa)
	ACN42_g153	Uncharacterized protein. (169 aa)
	ACN42_g49	TFIIA_gamma_C domain-containing protein. (74 aa)
	ACN42_g8689	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (293 aa)
	ACN42_g8264	RPOL9 domain-containing protein. (136 aa)
	ACN42_g8210	Uncharacterized protein. (72 aa)
	ACN42_g7485	TFIIB-type domain-containing protein. (350 aa)
	ACN42_g7188	Uncharacterized protein. (364 aa)
	ACN42_g6600	CYCLIN domain-containing protein; Belongs to the cyclin family. (428 aa)
	ACN42_g6400	LisH domain-containing protein. (150 aa)
	ACN42_g5507	BSD domain-containing protein. (643 aa)
	ACN42_g5296	Helicase ATP-binding domain-containing protein. (795 aa)
	ACN42_g4675	Uncharacterized protein. (153 aa)
	ACN42_g1945	TAF domain-containing protein. (442 aa)
	ACN42_g1947	TAFII28 domain-containing protein. (386 aa)
	ACN42_g1948	Acyl_transf_3 domain-containing protein. (474 aa)
	ACN42_g1931	Acyl_transf_3 domain-containing protein. (481 aa)
	ACN42_g1918	HTH TFE/IIEalpha-type domain-containing protein. (449 aa)
	ACN42_g1676	Uncharacterized protein. (371 aa)
	ACN42_g1658	Uncharacterized protein. (293 aa)
	ACN42_g1666	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1737 aa)
	ACN42_g1373	RING-type domain-containing protein. (370 aa)
	ACN42_g1408	RPOL4c domain-containing protein. (148 aa)
	ACN42_g1073	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (690 aa)
	ACN42_g775	Uncharacterized protein. (601 aa)
	ACN42_g10307	RPOLD domain-containing protein. (335 aa)
	ACN42_g9706	RNA_pol_L_2 domain-containing protein. (163 aa)
	ACN42_g6401	WD_REPEATS_REGION domain-containing protein. (600 aa)
	ACN42_g5989	DUF3591 domain-containing protein. (1116 aa)
	ACN42_g4707	Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (238 aa)
	ACN42_g8591	DUF4211 domain-containing protein. (563 aa)
	ACN42_g8618	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (404 aa)
	ACN42_g8719	Uncharacterized protein. (74 aa)
	ACN42_g8830	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (480 aa)
	ACN42_g10210	TAFII55_N domain-containing protein. (478 aa)
	spt15	TATA-box-binding protein. (293 aa)
	ACN42_g4719	Uncharacterized protein. (379 aa)
	ACN42_g3507	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	ACN42_g970	Uncharacterized protein. (362 aa)
	ACN42_g647	Uncharacterized protein. (822 aa)
	ACN42_g48	Uncharacterized protein. (370 aa)
	ACN42_g6916	Uncharacterized protein. (78 aa)
	ACN42_g5786	TFIID_20kDa domain-containing protein. (624 aa)
	ACN42_g4626	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1325 aa)
	ACN42_g1800	Uncharacterized protein. (234 aa)
	ACN42_g980	Uncharacterized protein. (353 aa)
	ACN42_g214	Uncharacterized protein. (168 aa)
	ACN42_g204	Uncharacterized protein. (1243 aa)

Your Current Organism:

Penicillium freii

NCBI taxonomy Id: 48697
Other names: CBS 476.84, IMI 285515, P. freii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN42_g10210	ACN42_g10307	A0A101MAF3	A0A117NKZ2	TAFII55_N domain-containing protein.	RPOLD domain-containing protein.	0.894
ACN42_g10210	ACN42_g1073	A0A101MAF3	A0A101MSL7	TAFII55_N domain-containing protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.911
ACN42_g10210	ACN42_g1373	A0A101MAF3	A0A101MS11	TAFII55_N domain-containing protein.	RING-type domain-containing protein.	0.862
ACN42_g10210	ACN42_g1408	A0A101MAF3	A0A101MS29	TAFII55_N domain-containing protein.	RPOL4c domain-containing protein.	0.861
ACN42_g10210	ACN42_g153	A0A101MAF3	A0A124GTM9	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.859
ACN42_g10210	ACN42_g154	A0A101MAF3	A0A124GTM4	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.835
ACN42_g10210	ACN42_g1658	A0A101MAF3	A0A101MRK7	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.999
ACN42_g10210	ACN42_g1666	A0A101MAF3	A0A101MRM0	TAFII55_N domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.865
ACN42_g10210	ACN42_g1676	A0A101MAF3	A0A101MRI4	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.889
ACN42_g10210	ACN42_g1800	A0A101MAF3	A0A124GSR5	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.867
ACN42_g10210	ACN42_g1918	A0A101MAF3	A0A101MR62	TAFII55_N domain-containing protein.	HTH TFE/IIEalpha-type domain-containing protein.	0.918
ACN42_g10210	ACN42_g1931	A0A101MAF3	A0A101MR43	TAFII55_N domain-containing protein.	Acyl_transf_3 domain-containing protein.	0.951
ACN42_g10210	ACN42_g1945	A0A101MAF3	A0A101MQZ5	TAFII55_N domain-containing protein.	TAF domain-containing protein.	0.999
ACN42_g10210	ACN42_g1947	A0A101MAF3	A0A101MR06	TAFII55_N domain-containing protein.	TAFII28 domain-containing protein.	0.967
ACN42_g10210	ACN42_g1948	A0A101MAF3	A0A101MR15	TAFII55_N domain-containing protein.	Acyl_transf_3 domain-containing protein.	0.951
ACN42_g10210	ACN42_g204	A0A101MAF3	A0A124GTM2	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.999
ACN42_g10210	ACN42_g214	A0A101MAF3	A0A124GTJ5	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.816
ACN42_g10210	ACN42_g3507	A0A101MAF3	A0A117NQA1	TAFII55_N domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.862
ACN42_g10210	ACN42_g4626	A0A101MAF3	A0A124GRW0	TAFII55_N domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.862
ACN42_g10210	ACN42_g4675	A0A101MAF3	A0A101MKU3	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.861