(35 nodes) Mixed, incl. Peptidase C1A, and Serine-type carboxypeptidase activity network (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103134994	Uncharacterized protein. (283 aa)
	LOC103146313	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (309 aa)
	LOC103155220	Cathepsin D; Belongs to the peptidase A1 family. (396 aa)
	ENSPFOP00000003028	Cathepsin F; Belongs to the peptidase C1 family. (470 aa)
	LOC103144232	Cathepsin L.1; Belongs to the peptidase C1 family. (334 aa)
	ENSPFOP00000004729	Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family. (478 aa)
	ENSPFOP00000005222	Cathepsin Bb; Belongs to the peptidase C1 family. (334 aa)
	LOC103147381	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (397 aa)
	LOC103151583	Cathepsin S, ortholog 1; Belongs to the peptidase C1 family. (331 aa)
	LOC103154411	Si:dkey-26g8.5; Belongs to the peptidase C1 family. (335 aa)
	ctsc	Cathepsin C; Belongs to the peptidase C1 family. (455 aa)
	LOC103156711	Cathepsin K; Belongs to the peptidase C1 family. (330 aa)
	LOC103156712	Cathepsin S, ortholog2, tandem duplicate 1; Belongs to the peptidase C1 family. (337 aa)
	ENSPFOP00000010263	Uncharacterized protein. (592 aa)
	lgmn	Legumain. (437 aa)
	LOC103154275	Nothepsin; Belongs to the peptidase A1 family. (405 aa)
	LOC103144587	Si:busm1-57f23.1. (142 aa)
	LOC103151050	Granulin b. (746 aa)
	LOC103134507	Uncharacterized protein. (113 aa)
	ENSPFOP00000013828	Uncharacterized protein. (135 aa)
	LOC103136480	Cathepsin Ba; Belongs to the peptidase C1 family. (338 aa)
	LOC103143289	Zgc:103438; Belongs to the peptidase C1 family. (551 aa)
	ctsz	Cathepsin Z; Belongs to the peptidase C1 family. (303 aa)
	LOC103137087	Cathepsin 12; Belongs to the peptidase C1 family. (352 aa)
	LOC103134156	Cystatin C; Belongs to the cystatin family. (126 aa)
	LOC103134159	Cystatin domain-containing protein; Belongs to the cystatin family. (138 aa)
	LOC103136588	Carboxypeptidase; Belongs to the peptidase S10 family. (466 aa)
	ENSPFOP00000018477	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (310 aa)
	ENSPFOP00000019097	Cathepsin O; Belongs to the peptidase C1 family. (340 aa)
	scpep1	Carboxypeptidase; Belongs to the peptidase S10 family. (438 aa)
	ENSPFOP00000021369	Cystatin domain-containing protein. (110 aa)
	ctsh	Cathepsin H; Belongs to the peptidase C1 family. (325 aa)
	LOC103146862	Uncharacterized protein. (399 aa)
	ENSPFOP00000026020	Cystatin domain-containing protein. (139 aa)
	LOC103134511	Uncharacterized protein. (123 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000003028	ENSPFOP00000004729	ENSPFOP00000003028	ENSPFOP00000004729	Cathepsin F; Belongs to the peptidase C1 family.	Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family.	0.695
ENSPFOP00000003028	ENSPFOP00000005222	ENSPFOP00000003028	ENSPFOP00000005222	Cathepsin F; Belongs to the peptidase C1 family.	Cathepsin Bb; Belongs to the peptidase C1 family.	0.787
ENSPFOP00000003028	ENSPFOP00000010263	ENSPFOP00000003028	ENSPFOP00000010263	Cathepsin F; Belongs to the peptidase C1 family.	Uncharacterized protein.	0.685
ENSPFOP00000003028	ENSPFOP00000013828	ENSPFOP00000003028	ENSPFOP00000013828	Cathepsin F; Belongs to the peptidase C1 family.	Uncharacterized protein.	0.751
ENSPFOP00000003028	ENSPFOP00000018477	ENSPFOP00000003028	ENSPFOP00000018477	Cathepsin F; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.784
ENSPFOP00000003028	ENSPFOP00000019097	ENSPFOP00000003028	ENSPFOP00000019097	Cathepsin F; Belongs to the peptidase C1 family.	Cathepsin O; Belongs to the peptidase C1 family.	0.733
ENSPFOP00000003028	ENSPFOP00000021369	ENSPFOP00000003028	ENSPFOP00000021369	Cathepsin F; Belongs to the peptidase C1 family.	Cystatin domain-containing protein.	0.591
ENSPFOP00000003028	ENSPFOP00000026020	ENSPFOP00000003028	ENSPFOP00000026020	Cathepsin F; Belongs to the peptidase C1 family.	Cystatin domain-containing protein.	0.591
ENSPFOP00000003028	LOC103134156	ENSPFOP00000003028	ENSPFOP00000017308	Cathepsin F; Belongs to the peptidase C1 family.	Cystatin C; Belongs to the cystatin family.	0.690
ENSPFOP00000003028	LOC103134159	ENSPFOP00000003028	ENSPFOP00000017328	Cathepsin F; Belongs to the peptidase C1 family.	Cystatin domain-containing protein; Belongs to the cystatin family.	0.575
ENSPFOP00000003028	LOC103134507	ENSPFOP00000003028	ENSPFOP00000013825	Cathepsin F; Belongs to the peptidase C1 family.	Uncharacterized protein.	0.751
ENSPFOP00000003028	LOC103134511	ENSPFOP00000003028	ENSPFOP00000028656	Cathepsin F; Belongs to the peptidase C1 family.	Uncharacterized protein.	0.751
ENSPFOP00000003028	LOC103134994	ENSPFOP00000003028	ENSPFOP00000000580	Cathepsin F; Belongs to the peptidase C1 family.	Uncharacterized protein.	0.685
ENSPFOP00000003028	LOC103136480	ENSPFOP00000003028	ENSPFOP00000013947	Cathepsin F; Belongs to the peptidase C1 family.	Cathepsin Ba; Belongs to the peptidase C1 family.	0.787
ENSPFOP00000003028	LOC103136588	ENSPFOP00000003028	ENSPFOP00000018278	Cathepsin F; Belongs to the peptidase C1 family.	Carboxypeptidase; Belongs to the peptidase S10 family.	0.702
ENSPFOP00000003028	LOC103137087	ENSPFOP00000003028	ENSPFOP00000016421	Cathepsin F; Belongs to the peptidase C1 family.	Cathepsin 12; Belongs to the peptidase C1 family.	0.624
ENSPFOP00000003028	LOC103143289	ENSPFOP00000003028	ENSPFOP00000014369	Cathepsin F; Belongs to the peptidase C1 family.	Zgc:103438; Belongs to the peptidase C1 family.	0.591
ENSPFOP00000003028	LOC103144232	ENSPFOP00000003028	ENSPFOP00000004507	Cathepsin F; Belongs to the peptidase C1 family.	Cathepsin L.1; Belongs to the peptidase C1 family.	0.745
ENSPFOP00000003028	LOC103144587	ENSPFOP00000003028	ENSPFOP00000012613	Cathepsin F; Belongs to the peptidase C1 family.	Si:busm1-57f23.1.	0.591
ENSPFOP00000003028	LOC103146313	ENSPFOP00000003028	ENSPFOP00000000744	Cathepsin F; Belongs to the peptidase C1 family.	Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.	0.784