(21 nodes) SNARE complex network (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	napg	N-ethylmaleimide-sensitive factor attachment protein, gamma b. (313 aa)
	vti1a	Vesicle transport through interaction with t-SNAREs 1A. (224 aa)
	stx8	Syntaxin 8. (237 aa)
	ENSPFOP00000002464	N-ethylmaleimide-sensitive factor attachment protein, beta b. (298 aa)
	vamp7	Synaptobrevin-like 1; Belongs to the synaptobrevin family. (220 aa)
	ENSPFOP00000005847	SynN domain-containing protein. (213 aa)
	LOC103152417	Vesicle-associated membrane protein 8 (endobrevin). (122 aa)
	stx10	Syntaxin 10. (241 aa)
	stx6	Syntaxin 6; Belongs to the syntaxin family. (255 aa)
	ENSPFOP00000012637	Syntaxin 7-like; Belongs to the syntaxin family. (263 aa)
	LOC103150347	Uncharacterized protein. (295 aa)
	snap29	Synaptosome associated protein 29. (258 aa)
	nsf	N-ethylmaleimide-sensitive factor a. (743 aa)
	ykt6	YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. (198 aa)
	vamp4	Vesicle-associated membrane protein 4. (154 aa)
	stx17	Syntaxin 17; Belongs to the syntaxin family. (298 aa)
	vti1b	Vesicle transport through interaction with t-SNAREs 1B. (227 aa)
	LOC103151013	Si:ch73-234b20.5. (147 aa)
	LOC103144292	Syntaxin 16. (208 aa)
	ENSPFOP00000027540	V-SNARE coiled-coil homology domain-containing protein. (105 aa)
	ENSPFOP00000029291	SynN domain-containing protein. (204 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000002464	ENSPFOP00000005847	ENSPFOP00000002464	ENSPFOP00000005847	N-ethylmaleimide-sensitive factor attachment protein, beta b.	SynN domain-containing protein.	0.851
ENSPFOP00000002464	ENSPFOP00000012637	ENSPFOP00000002464	ENSPFOP00000012637	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Syntaxin 7-like; Belongs to the syntaxin family.	0.919
ENSPFOP00000002464	ENSPFOP00000027540	ENSPFOP00000002464	ENSPFOP00000027540	N-ethylmaleimide-sensitive factor attachment protein, beta b.	V-SNARE coiled-coil homology domain-containing protein.	0.866
ENSPFOP00000002464	ENSPFOP00000029291	ENSPFOP00000002464	ENSPFOP00000029291	N-ethylmaleimide-sensitive factor attachment protein, beta b.	SynN domain-containing protein.	0.919
ENSPFOP00000002464	LOC103144292	ENSPFOP00000002464	ENSPFOP00000025663	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Syntaxin 16.	0.953
ENSPFOP00000002464	LOC103151013	ENSPFOP00000002464	ENSPFOP00000022929	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Si:ch73-234b20.5.	0.836
ENSPFOP00000002464	LOC103152417	ENSPFOP00000002464	ENSPFOP00000008031	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Vesicle-associated membrane protein 8 (endobrevin).	0.866
ENSPFOP00000002464	napg	ENSPFOP00000002464	ENSPFOP00000001461	N-ethylmaleimide-sensitive factor attachment protein, beta b.	N-ethylmaleimide-sensitive factor attachment protein, gamma b.	0.909
ENSPFOP00000002464	nsf	ENSPFOP00000002464	ENSPFOP00000014387	N-ethylmaleimide-sensitive factor attachment protein, beta b.	N-ethylmaleimide-sensitive factor a.	0.940
ENSPFOP00000002464	snap29	ENSPFOP00000002464	ENSPFOP00000013889	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Synaptosome associated protein 29.	0.804
ENSPFOP00000002464	stx10	ENSPFOP00000002464	ENSPFOP00000008343	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Syntaxin 10.	0.900
ENSPFOP00000002464	stx17	ENSPFOP00000002464	ENSPFOP00000017606	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Syntaxin 17; Belongs to the syntaxin family.	0.877
ENSPFOP00000002464	stx6	ENSPFOP00000002464	ENSPFOP00000009677	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Syntaxin 6; Belongs to the syntaxin family.	0.900
ENSPFOP00000002464	stx8	ENSPFOP00000002464	ENSPFOP00000002446	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Syntaxin 8.	0.893
ENSPFOP00000002464	vamp4	ENSPFOP00000002464	ENSPFOP00000014855	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Vesicle-associated membrane protein 4.	0.843
ENSPFOP00000002464	vamp7	ENSPFOP00000002464	ENSPFOP00000002487	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Synaptobrevin-like 1; Belongs to the synaptobrevin family.	0.782
ENSPFOP00000002464	vti1a	ENSPFOP00000002464	ENSPFOP00000002442	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Vesicle transport through interaction with t-SNAREs 1A.	0.962
ENSPFOP00000002464	vti1b	ENSPFOP00000002464	ENSPFOP00000017978	N-ethylmaleimide-sensitive factor attachment protein, beta b.	Vesicle transport through interaction with t-SNAREs 1B.	0.938
ENSPFOP00000002464	ykt6	ENSPFOP00000002464	ENSPFOP00000014794	N-ethylmaleimide-sensitive factor attachment protein, beta b.	YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.	0.951
ENSPFOP00000005847	ENSPFOP00000002464	ENSPFOP00000005847	ENSPFOP00000002464	SynN domain-containing protein.	N-ethylmaleimide-sensitive factor attachment protein, beta b.	0.851