STRINGSTRING
vti1a vti1a stx8 stx8 stx10 stx10 stx6 stx6 ENSPFOP00000012637 ENSPFOP00000012637 LOC103150347 LOC103150347 ykt6 ykt6 vamp4 vamp4 vti1b vti1b LOC103144292 LOC103144292
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
vti1aVesicle transport through interaction with t-SNAREs 1A. (224 aa)
stx8Syntaxin 8. (237 aa)
stx10Syntaxin 10. (241 aa)
stx6Syntaxin 6; Belongs to the syntaxin family. (255 aa)
ENSPFOP00000012637Syntaxin 7-like; Belongs to the syntaxin family. (263 aa)
LOC103150347Uncharacterized protein. (295 aa)
ykt6YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family. (198 aa)
vamp4Vesicle-associated membrane protein 4. (154 aa)
vti1bVesicle transport through interaction with t-SNAREs 1B. (227 aa)
LOC103144292Syntaxin 16. (208 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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