50 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nup98	Nucleoporin 98. (1820 aa)
	AAAS	Aladin WD repeat nucleoporin. (370 aa)
	LOC103150752	Exportin 1 (CRM1 homolog, yeast) a. (1066 aa)
	LOC103145252	Nucleoporin 42. (419 aa)
	ENSPFOP00000003297	ELYS domain-containing protein. (152 aa)
	LOC103138818	Si:ch211-216l23.2. (429 aa)
	nup54	Uncharacterized protein. (566 aa)
	rae1	Ribonucleic acid export 1. (368 aa)
	adgrb1	Adhesion G protein-coupled receptor B1a; Belongs to the G-protein coupled receptor 2 family. (1593 aa)
	nup188	Nucleoporin 188. (1749 aa)
	tpr	Translocated promoter region a, nuclear basket protein. (2481 aa)
	nup160	Nucleoporin 160. (1396 aa)
	ranbp2	RAN binding protein 2. (3082 aa)
	kpnb1	Karyopherin (importin) beta 1. (876 aa)
	rcc1	Regulator of chromosome condensation 1. (420 aa)
	nup58	Nucleoporin 58. (594 aa)
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (296 aa)
	aaas	Achalasia, adrenocortical insufficiency, alacrimia. (518 aa)
	NUP214	Nucleoporin 214. (1694 aa)
	ndc1	NDC1 transmembrane nucleoporin. (669 aa)
	ENSPFOP00000010929	Nucleoporin 205. (2030 aa)
	ranbp1	RAN binding protein 1. (217 aa)
	nup88	Nucleoporin 88. (713 aa)
	ENSPFOP00000012319	Adhesion G protein-coupled receptor B3. (825 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
	nup133	Nucleoporin 133. (1116 aa)
	NUP62	Nucleoporin 62. (553 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
	ENSPFOP00000013288	Nucleoporin 153. (1456 aa)
	LOC103154927	Exportin 1 (CRM1 homolog, yeast) b. (1071 aa)
	LOC103134574	Nuclear receptor coactivator 5. (614 aa)
	gle1	GLE1 RNA export mediator. (747 aa)
	LOC103137288	Translocated promoter region b, nuclear basket protein. (2358 aa)
	snupn	Snurportin 1. (376 aa)
	rangap1	RAN GTPase activating protein 1a. (578 aa)
	nup50	Nucleoporin 50. (449 aa)
	nup210	Nucleoporin 210. (1880 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
	ahctf1	AT hook containing transcription factor 1. (2487 aa)
	LOC103143341	Ran GTPase activating protein 1b. (564 aa)
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (902 aa)
	ENSPFOP00000017429	Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family. (896 aa)
	ENSPFOP00000018099	Nucleoporin 37. (327 aa)
	cd164	CD164 molecule, sialomucin. (170 aa)
	nup155	Nucleoporin 155. (1367 aa)
	ENSPFOP00000022111	Uncharacterized protein. (306 aa)
	ENSPFOP00000022563	Adhesion G protein-coupled receptor B3; Belongs to the G-protein coupled receptor 2 family. (689 aa)
	nup43	Nucleoporin 43. (370 aa)
	lekr1	Uncharacterized protein. (483 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAAS	ENSPFOP00000003297	ENSPFOP00000000449	ENSPFOP00000003297	Aladin WD repeat nucleoporin.	ELYS domain-containing protein.	0.623
AAAS	ENSPFOP00000010929	ENSPFOP00000000449	ENSPFOP00000010929	Aladin WD repeat nucleoporin.	Nucleoporin 205.	0.960
AAAS	ENSPFOP00000013288	ENSPFOP00000000449	ENSPFOP00000013288	Aladin WD repeat nucleoporin.	Nucleoporin 153.	0.826
AAAS	ENSPFOP00000018099	ENSPFOP00000000449	ENSPFOP00000018099	Aladin WD repeat nucleoporin.	Nucleoporin 37.	0.893
AAAS	LOC103134574	ENSPFOP00000000449	ENSPFOP00000013413	Aladin WD repeat nucleoporin.	Nuclear receptor coactivator 5.	0.791
AAAS	LOC103137288	ENSPFOP00000000449	ENSPFOP00000014127	Aladin WD repeat nucleoporin.	Translocated promoter region b, nuclear basket protein.	0.742
AAAS	LOC103138818	ENSPFOP00000000449	ENSPFOP00000003318	Aladin WD repeat nucleoporin.	Si:ch211-216l23.2.	0.791
AAAS	LOC103143341	ENSPFOP00000000449	ENSPFOP00000017011	Aladin WD repeat nucleoporin.	Ran GTPase activating protein 1b.	0.608
AAAS	LOC103145252	ENSPFOP00000000449	ENSPFOP00000001529	Aladin WD repeat nucleoporin.	Nucleoporin 42.	0.832
AAAS	NUP214	ENSPFOP00000000449	ENSPFOP00000010841	Aladin WD repeat nucleoporin.	Nucleoporin 214.	0.922
AAAS	NUP62	ENSPFOP00000000449	ENSPFOP00000012658	Aladin WD repeat nucleoporin.	Nucleoporin 62.	0.859
AAAS	ahctf1	ENSPFOP00000000449	ENSPFOP00000016692	Aladin WD repeat nucleoporin.	AT hook containing transcription factor 1.	0.623
AAAS	cd164	ENSPFOP00000000449	ENSPFOP00000019665	Aladin WD repeat nucleoporin.	CD164 molecule, sialomucin.	0.712
AAAS	gle1	ENSPFOP00000000449	ENSPFOP00000013854	Aladin WD repeat nucleoporin.	GLE1 RNA export mediator.	0.783
AAAS	lekr1	ENSPFOP00000000449	ENSPFOP00000023228	Aladin WD repeat nucleoporin.	Uncharacterized protein.	0.711
AAAS	ndc1	ENSPFOP00000000449	ENSPFOP00000010847	Aladin WD repeat nucleoporin.	NDC1 transmembrane nucleoporin.	0.957
AAAS	nup107	ENSPFOP00000000449	ENSPFOP00000017381	Aladin WD repeat nucleoporin.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.966
AAAS	nup133	ENSPFOP00000000449	ENSPFOP00000012587	Aladin WD repeat nucleoporin.	Nucleoporin 133.	0.906
AAAS	nup155	ENSPFOP00000000449	ENSPFOP00000019937	Aladin WD repeat nucleoporin.	Nucleoporin 155.	0.964
AAAS	nup160	ENSPFOP00000000449	ENSPFOP00000006973	Aladin WD repeat nucleoporin.	Nucleoporin 160.	0.913