STRINGSTRING
nup98 nup98 nup54 nup54 rae1 rae1 nup188 nup188 nup160 nup160 ranbp2 ranbp2 nup58 nup58 nup35 nup35 NUP214 NUP214 ndc1 ndc1 ENSPFOP00000010929 ENSPFOP00000010929 nup88 nup88 nup85 nup85 nup133 nup133 NUP62 NUP62 nup93 nup93 ENSPFOP00000013288 ENSPFOP00000013288 nup50 nup50 nup210 nup210 sec13 sec13 nup107 nup107 ENSPFOP00000018099 ENSPFOP00000018099 nup155 nup155 nup43 nup43 seh1l seh1l
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nup98Nucleoporin 98. (1820 aa)
nup54Uncharacterized protein. (566 aa)
rae1Ribonucleic acid export 1. (368 aa)
nup188Nucleoporin 188. (1749 aa)
nup160Nucleoporin 160. (1396 aa)
ranbp2RAN binding protein 2. (3082 aa)
nup58Nucleoporin 58. (594 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (296 aa)
NUP214Nucleoporin 214. (1694 aa)
ndc1NDC1 transmembrane nucleoporin. (669 aa)
ENSPFOP00000010929Nucleoporin 205. (2030 aa)
nup88Nucleoporin 88. (713 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
nup133Nucleoporin 133. (1116 aa)
NUP62Nucleoporin 62. (553 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
ENSPFOP00000013288Nucleoporin 153. (1456 aa)
nup50Nucleoporin 50. (449 aa)
nup210Nucleoporin 210. (1880 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (902 aa)
ENSPFOP00000018099Nucleoporin 37. (327 aa)
nup155Nucleoporin 155. (1367 aa)
nup43Nucleoporin 43. (370 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.