(88 nodes) Neuron migration network (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPFOP00000031086	Homeobox domain-containing protein. (312 aa)
	ENSPFOP00000001349	Si:ch211-193k19.1. (918 aa)
	adgra3	Adhesion G protein-coupled receptor A3; Belongs to the G-protein coupled receptor 2 family. (1350 aa)
	LOC103144605	Vang-like protein. (525 aa)
	ENSPFOP00000001999	Cadherin, EGF LAG seven-pass G-type receptor 2; Belongs to the G-protein coupled receptor 2 family. (2962 aa)
	CDH2	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (906 aa)
	ADGRL3	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family. (1570 aa)
	NAV1	Neuron navigator 1. (1859 aa)
	ENSPFOP00000003186	RE1-silencing transcription factor. (877 aa)
	ENSPFOP00000003217	GATA binding protein 2a. (435 aa)
	ENSPFOP00000003588	DCC netrin 1 receptor. (788 aa)
	GATA2	GATA binding protein 2. (462 aa)
	barhl1	Homeobox domain-containing protein. (327 aa)
	ENSPFOP00000003757	Rap guanine nucleotide exchange factor (GEF) 6. (1572 aa)
	MDGA2	MAM domain containing glycosylphosphatidylinositol anchor 2. (955 aa)
	ENSPFOP00000005575	Contactin 2. (1039 aa)
	ENSPFOP00000006042	Doublecortin-like kinase 1b. (684 aa)
	ENSPFOP00000006214	Neuropilin; Belongs to the neuropilin family. (953 aa)
	ENSPFOP00000006369	Cadherin, EGF LAG seven-pass G-type receptor 3; Belongs to the G-protein coupled receptor 2 family. (2986 aa)
	ENSPFOP00000006480	Doublecortin-like kinase 1b. (753 aa)
	alkbh1	AlkB homolog 1, histone H2A dioxygenase. (380 aa)
	ENSPFOP00000006799	FAT atypical cadherin 3a. (4594 aa)
	ENSPFOP00000007192	Uncharacterized protein. (246 aa)
	pcm1	Pericentriolar material 1. (2111 aa)
	ENSPFOP00000008705	Cholecystokinin b. (141 aa)
	ENSPFOP00000009171	Cadherin EGF LAG seven-pass G-type receptor 1a; Belongs to the G-protein coupled receptor 2 family. (3068 aa)
	DCC	DCC netrin 1 receptor. (639 aa)
	GPM6A	Glycoprotein M6Ab. (278 aa)
	lrrc1	Leucine rich repeat containing 1. (522 aa)
	gas6	Uncharacterized protein. (650 aa)
	ENSPFOP00000010782	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (759 aa)
	ENSPFOP00000011279	Forkhead box G1a. (402 aa)
	ENSPFOP00000011439	DAB adaptor protein 1b. (562 aa)
	ENSPFOP00000011510	Transcription elongation factor SPT5. (1004 aa)
	LOC103145206	CRK proto-oncogene, adaptor protein. (306 aa)
	VANGL2	Vang-like protein. (525 aa)
	dcx	Uncharacterized protein. (382 aa)
	pex13	SH3 domain-containing protein. (422 aa)
	cdk5	Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	astn1	Astrotactin 1. (1305 aa)
	RELN	Reelin. (3467 aa)
	auts2	Activator of transcription and developmental regulator AUTS2 a. (1276 aa)
	LOC103149224	Cyclin-dependent kinase 5 activator. (334 aa)
	LOC103134605	Neuron navigator 1b. (1838 aa)
	dnaaf4	Dynein axonemal assembly factor 4. (409 aa)
	ENSPFOP00000031159	Ig-like domain-containing protein. (200 aa)
	ENSPFOP00000014928	Si:ch73-215d9.1. (750 aa)
	BAX	BCL2 associated X, apoptosis regulator. (191 aa)
	cep85l	Centrosomal protein 85, like. (781 aa)
	ENSPFOP00000015438	DAB adaptor protein 1a. (558 aa)
	bbs4	Bardet-Biedl syndrome 4. (537 aa)
	LOC103143131	Integrin, alpha 3b; Belongs to the integrin alpha chain family. (1058 aa)
	ENSPFOP00000015954	Neogenin 1b. (1431 aa)
	ENSPFOP00000015962	Uncharacterized protein. (295 aa)
	ENSPFOP00000016019	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (439 aa)
	ENSPFOP00000016222	LIM homeobox 1a. (381 aa)
	LOC103137784	Adhesion G protein-coupled receptor L3.1; Belongs to the G-protein coupled receptor 2 family. (1583 aa)
	barhl2	BarH-like homeobox 2. (366 aa)
	LOC103143564	Cyclin-dependent kinase-like 5. (1142 aa)
	bbs1	Bardet-Biedl syndrome 1. (583 aa)
	ENSPFOP00000017750	FAT atypical cadherin 3b. (2475 aa)
	ENSPFOP00000017823	Fork-head domain-containing protein. (304 aa)
	cdk5r1	Cyclin-dependent kinase 5 activator. (308 aa)
	ENSPFOP00000018006	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1046 aa)
	phox2b	Paired like homeobox 2Bb. (285 aa)
	tubgcp2	Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. (875 aa)
	sh3rf1	SH3 domain containing ring finger 1. (851 aa)
	ndnf	Neuron-derived neurotrophic factor. (571 aa)
	rapgef2	Rap guanine nucleotide exchange factor (GEF) 2. (1590 aa)
	cck	Cholecystokinin a. (131 aa)
	CDKL5	Cyclin dependent kinase like 5. (1008 aa)
	gpm6a	Glycoprotein M6Aa. (278 aa)
	scrib	Scribble planar cell polarity protein. (1778 aa)
	ENSPFOP00000019455	DISC1 scaffold protein. (814 aa)
	crkl	V-crk avian sarcoma virus CT10 oncogene homolog-like. (299 aa)
	ENSPFOP00000019778	Uncharacterized protein. (263 aa)
	ASTN2	Astrotactin 2. (1373 aa)
	cdk5r2	Cyclin-dependent kinase 5, regulatory subunit 2b (p39). (290 aa)
	pomgnt2	Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-). (602 aa)
	ENSPFOP00000020997	Fork-head domain-containing protein. (310 aa)
	LOC103143475	Cyclin-dependent kinase 5 activator. (323 aa)
	ENSPFOP00000021594	Doublecortin-like kinase 1a. (353 aa)
	ENSPFOP00000022186	Uncharacterized protein. (532 aa)
	ENSPFOP00000022705	MAM domain containing glycosylphosphatidylinositol anchor 1. (536 aa)
	vegfa	Vascular endothelial growth factor Ab; Belongs to the PDGF/VEGF growth factor family. (214 aa)
	ENSPFOP00000026162	Serum response factor b. (601 aa)
	ENSPFOP00000027072	Uncharacterized protein. (227 aa)
	ENSPFOP00000030391	MADS-box domain-containing protein. (378 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRL3	ENSPFOP00000019455	ENSPFOP00000002188	ENSPFOP00000019455	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	DISC1 scaffold protein.	0.406
ADGRL3	adgra3	ENSPFOP00000002188	ENSPFOP00000001695	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Adhesion G protein-coupled receptor A3; Belongs to the G-protein coupled receptor 2 family.	0.745
ADGRL3	lrrc1	ENSPFOP00000002188	ENSPFOP00000009693	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Leucine rich repeat containing 1.	0.739
ADGRL3	scrib	ENSPFOP00000002188	ENSPFOP00000019328	Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.	Scribble planar cell polarity protein.	0.739
ASTN2	ENSPFOP00000006042	ENSPFOP00000019982	ENSPFOP00000006042	Astrotactin 2.	Doublecortin-like kinase 1b.	0.459
ASTN2	ENSPFOP00000006480	ENSPFOP00000019982	ENSPFOP00000006480	Astrotactin 2.	Doublecortin-like kinase 1b.	0.459
ASTN2	ENSPFOP00000016019	ENSPFOP00000019982	ENSPFOP00000016019	Astrotactin 2.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.459
ASTN2	ENSPFOP00000021594	ENSPFOP00000019982	ENSPFOP00000021594	Astrotactin 2.	Doublecortin-like kinase 1a.	0.459
CDH2	ENSPFOP00000010782	ENSPFOP00000002075	ENSPFOP00000010782	Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.900
DCC	ENSPFOP00000003588	ENSPFOP00000009465	ENSPFOP00000003588	DCC netrin 1 receptor.	DCC netrin 1 receptor.	0.912
ENSPFOP00000001349	dnaaf4	ENSPFOP00000001349	ENSPFOP00000014745	Si:ch211-193k19.1.	Dynein axonemal assembly factor 4.	0.457
ENSPFOP00000001999	LOC103144605	ENSPFOP00000001999	ENSPFOP00000001974	Cadherin, EGF LAG seven-pass G-type receptor 2; Belongs to the G-protein coupled receptor 2 family.	Vang-like protein.	0.560
ENSPFOP00000001999	VANGL2	ENSPFOP00000001999	ENSPFOP00000012433	Cadherin, EGF LAG seven-pass G-type receptor 2; Belongs to the G-protein coupled receptor 2 family.	Vang-like protein.	0.560
ENSPFOP00000003217	ENSPFOP00000006042	ENSPFOP00000003217	ENSPFOP00000006042	GATA binding protein 2a.	Doublecortin-like kinase 1b.	0.405
ENSPFOP00000003217	ENSPFOP00000006480	ENSPFOP00000003217	ENSPFOP00000006480	GATA binding protein 2a.	Doublecortin-like kinase 1b.	0.405
ENSPFOP00000003217	ENSPFOP00000016019	ENSPFOP00000003217	ENSPFOP00000016019	GATA binding protein 2a.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.405
ENSPFOP00000003217	ENSPFOP00000016222	ENSPFOP00000003217	ENSPFOP00000016222	GATA binding protein 2a.	LIM homeobox 1a.	0.452
ENSPFOP00000003217	ENSPFOP00000021594	ENSPFOP00000003217	ENSPFOP00000021594	GATA binding protein 2a.	Doublecortin-like kinase 1a.	0.405
ENSPFOP00000003217	ENSPFOP00000026162	ENSPFOP00000003217	ENSPFOP00000026162	GATA binding protein 2a.	Serum response factor b.	0.697
ENSPFOP00000003217	ENSPFOP00000030391	ENSPFOP00000003217	ENSPFOP00000030391	GATA binding protein 2a.	MADS-box domain-containing protein.	0.697