27 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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co-expression

protein homology

Your Input:
	ENSPFOP00000014349	TAFH domain-containing protein. (953 aa)
	taf12	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (131 aa)
	ENSPFOP00000014732	TAFH domain-containing protein. (1080 aa)
	ENSPFOP00000014830	TATA box binding protein. (315 aa)
	gtf2e2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
	ENSPFOP00000017193	Excision repair cross-complementation group 2. (760 aa)
	gtf2b	General transcription factor IIB. (318 aa)
	ENSPFOP00000018214	General transcription factor IIH, polypeptide 3. (303 aa)
	taf13	TATA-box binding protein associated factor 13. (125 aa)
	taf11	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (208 aa)
	LOC103130849	TAFH domain-containing protein. (921 aa)
	gtf2a2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
	taf8	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (306 aa)
	gtf2a1	General transcription factor IIA, 1. (393 aa)
	ENSPFOP00000002806	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (252 aa)
	ENSPFOP00000003440	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1725 aa)
	LOC103145803	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (850 aa)
	taf2	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1219 aa)
	ENSPFOP00000008518	General transcription factor IIE, polypeptide 1, alpha. (463 aa)
	LOC103145653	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (637 aa)
	TAF4	TATA-box binding protein associated factor 4. (856 aa)
	gtf2f1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
	taf10	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
	ENSPFOP00000012455	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (468 aa)
	taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (942 aa)
	taf6l	TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (646 aa)
	taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (362 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000002806	ENSPFOP00000003440	ENSPFOP00000002806	ENSPFOP00000003440	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000002806	ENSPFOP00000008518	ENSPFOP00000002806	ENSPFOP00000008518	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	General transcription factor IIE, polypeptide 1, alpha.	0.959
ENSPFOP00000002806	ENSPFOP00000012455	ENSPFOP00000002806	ENSPFOP00000012455	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.936
ENSPFOP00000002806	ENSPFOP00000014349	ENSPFOP00000002806	ENSPFOP00000014349	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAFH domain-containing protein.	0.948
ENSPFOP00000002806	ENSPFOP00000014732	ENSPFOP00000002806	ENSPFOP00000014732	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAFH domain-containing protein.	0.948
ENSPFOP00000002806	ENSPFOP00000014830	ENSPFOP00000002806	ENSPFOP00000014830	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TATA box binding protein.	0.979
ENSPFOP00000002806	ENSPFOP00000017193	ENSPFOP00000002806	ENSPFOP00000017193	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Excision repair cross-complementation group 2.	0.957
ENSPFOP00000002806	ENSPFOP00000018214	ENSPFOP00000002806	ENSPFOP00000018214	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	General transcription factor IIH, polypeptide 3.	0.954
ENSPFOP00000002806	LOC103130849	ENSPFOP00000002806	ENSPFOP00000000469	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAFH domain-containing protein.	0.948
ENSPFOP00000002806	LOC103145653	ENSPFOP00000002806	ENSPFOP00000008650	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000002806	LOC103145803	ENSPFOP00000002806	ENSPFOP00000005672	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.948
ENSPFOP00000002806	TAF4	ENSPFOP00000002806	ENSPFOP00000010203	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TATA-box binding protein associated factor 4.	0.948
ENSPFOP00000002806	gtf2a1	ENSPFOP00000002806	ENSPFOP00000001273	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	General transcription factor IIA, 1.	0.924
ENSPFOP00000002806	gtf2a2	ENSPFOP00000002806	ENSPFOP00000000045	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.990
ENSPFOP00000002806	gtf2b	ENSPFOP00000002806	ENSPFOP00000017242	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	General transcription factor IIB.	0.994
ENSPFOP00000002806	gtf2e2	ENSPFOP00000002806	ENSPFOP00000016483	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.962
ENSPFOP00000002806	gtf2f1	ENSPFOP00000002806	ENSPFOP00000011064	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.962
ENSPFOP00000002806	taf10	ENSPFOP00000002806	ENSPFOP00000011539	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000002806	taf11	ENSPFOP00000002806	ENSPFOP00000008957	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
ENSPFOP00000002806	taf12	ENSPFOP00000002806	ENSPFOP00000014528	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999