STRINGSTRING
LOC103131284 LOC103131284 ENSPFOP00000029491 ENSPFOP00000029491 LOC103129543 LOC103129543 LOC103134070 LOC103134070 ENSPFOP00000027390 ENSPFOP00000027390 ENSPFOP00000026565 ENSPFOP00000026565 ENSPFOP00000026417 ENSPFOP00000026417 ENSPFOP00000024865 ENSPFOP00000024865 snapc5 snapc5 ENSPFOP00000024156 ENSPFOP00000024156 LOC103142478 LOC103142478 LOC103133374-5 LOC103133374-5 LOC103133374-4 LOC103133374-4 taf13 taf13 LOC103133374-3 LOC103133374-3 LOC103133374-2 LOC103133374-2 brf2 brf2 ENSPFOP00000019751 ENSPFOP00000019751 gtf2h5 gtf2h5 gtf2b gtf2b polr2i polr2i gtf2e2 gtf2e2 dr1 dr1 gcc1 gcc1 taf1b taf1b gtf2f2 gtf2f2 ercc3 ercc3 LOC103133374 LOC103133374 LOC103149249 LOC103149249 ENSPFOP00000015203 ENSPFOP00000015203 ENSPFOP00000014830 ENSPFOP00000014830 ENSPFOP00000014732 ENSPFOP00000014732 taf12 taf12 ENSPFOP00000014349 ENSPFOP00000014349 taf7 taf7 ENSPFOP00000013745 ENSPFOP00000013745 taf6l taf6l cavin1 cavin1 taf3 taf3 ENSPFOP00000012463 ENSPFOP00000012463 rsf1 rsf1 taf10 taf10 tfam tfam gtf2f1 gtf2f1 tfb2m tfb2m ENSPFOP00000010835 ENSPFOP00000010835 ENSPFOP00000010827 ENSPFOP00000010827 ENSPFOP00000010474 ENSPFOP00000010474 TAF4 TAF4 ubtf ubtf taf11 taf11 polr2d polr2d LOC103145653 LOC103145653 crcp crcp ENSPFOP00000030770 ENSPFOP00000030770 ENSPFOP00000008518 ENSPFOP00000008518 ncoa6 ncoa6 LOC103153833 LOC103153833 ENSPFOP00000007709 ENSPFOP00000007709 taf2 taf2 LOC103143485 LOC103143485 LOC103145803 LOC103145803 ENSPFOP00000004097 ENSPFOP00000004097 ENSPFOP00000003765 ENSPFOP00000003765 gtf3c4 gtf3c4 ENSPFOP00000003440 ENSPFOP00000003440 eloa eloa ENSPFOP00000002882 ENSPFOP00000002882 ENSPFOP00000002819 ENSPFOP00000002819 ENSPFOP00000002806 ENSPFOP00000002806 ENSPFOP00000002792 ENSPFOP00000002792 ENSPFOP00000002373 ENSPFOP00000002373 gtf2a1 gtf2a1 twistnb twistnb ENSPFOP00000001063 ENSPFOP00000001063 LOC103130849 LOC103130849 taf8 taf8 gtf2a2 gtf2a2 ENSPFOP00000030966 ENSPFOP00000030966
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103131284Uncharacterized protein. (1798 aa)
ENSPFOP00000029491Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (111 aa)
LOC103129543Uncharacterized protein. (442 aa)
LOC103134070Elongin A, like. (658 aa)
ENSPFOP00000027390General transcription factor IIIC, polypeptide 5. (543 aa)
ENSPFOP00000026565RRN3 homolog, RNA polymerase I transcription factor. (484 aa)
ENSPFOP00000026417Uncharacterized protein. (1588 aa)
ENSPFOP00000024865PHD-type domain-containing protein. (977 aa)
snapc5Small nuclear RNA activating complex, polypeptide 5. (118 aa)
ENSPFOP00000024156Polymerase (RNA) mitochondrial (DNA directed). (1031 aa)
LOC103142478Caveolae associated protein 1b. (469 aa)
LOC103133374-5Histone H4. (103 aa)
LOC103133374-4Histone H4. (103 aa)
taf13TATA-box binding protein associated factor 13. (125 aa)
LOC103133374-3Histone H4. (103 aa)
LOC103133374-2Histone H4. (103 aa)
brf2BRF2 RNA polymerase III transcription initiation factor subunit. (443 aa)
ENSPFOP00000019751RNA polymerase I subunit E. (445 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
dr1Down-regulator of transcription 1. (176 aa)
gcc1GRIP and coiled-coil domain containing 1. (756 aa)
taf1bTATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (598 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (312 aa)
ercc3Excision repair cross-complementation group 3. (780 aa)
LOC103133374Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC103149249Uncharacterized protein. (612 aa)
ENSPFOP00000015203General transcription factor IIA, 1-like. (430 aa)
ENSPFOP00000014830TATA box binding protein. (315 aa)
ENSPFOP00000014732TAFH domain-containing protein. (1080 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (131 aa)
ENSPFOP00000014349TAFH domain-containing protein. (953 aa)
taf7TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (362 aa)
ENSPFOP00000013745Polymerase (RNA) III (DNA directed) polypeptide H. (217 aa)
taf6lTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (646 aa)
cavin1Caveolae associated protein 1a. (418 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (942 aa)
ENSPFOP00000012463B-block_TFIIIC domain-containing protein. (2152 aa)
rsf1PHD-type domain-containing protein. (1373 aa)
taf10TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
tfamTranscription factor A, mitochondrial. (298 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
tfb2mrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (387 aa)
ENSPFOP00000010835Upstream binding transcription factor, like. (699 aa)
ENSPFOP00000010827TBP-like 1. (126 aa)
ENSPFOP00000010474Zgc:162472. (531 aa)
TAF4TATA-box binding protein associated factor 4. (856 aa)
ubtfUpstream binding transcription factor. (738 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (208 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
LOC103145653TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (637 aa)
crcpCalcitonin gene-related peptide-receptor component protein. (148 aa)
ENSPFOP00000030770Uncharacterized protein. (147 aa)
ENSPFOP00000008518General transcription factor IIE, polypeptide 1, alpha. (463 aa)
ncoa6Nuclear receptor coactivator 6. (2361 aa)
LOC103153833TFIIB-type domain-containing protein. (682 aa)
ENSPFOP00000007709TFIIF_beta domain-containing protein. (140 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1219 aa)
LOC103143485Lipase, hormone-sensitive a. (688 aa)
LOC103145803TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (850 aa)
ENSPFOP00000004097Uncharacterized protein. (181 aa)
ENSPFOP00000003765Partner of NOB1 homolog. (250 aa)
gtf3c4General transcription factor IIIC, polypeptide 4. (769 aa)
ENSPFOP00000003440TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1725 aa)
eloaElongin A. (687 aa)
ENSPFOP00000002882Lipase, hormone-sensitive b. (873 aa)
ENSPFOP00000002819Cyclin H; Belongs to the cyclin family. (334 aa)
ENSPFOP00000002806TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (252 aa)
ENSPFOP00000002792Cyclin H; Belongs to the cyclin family. (321 aa)
ENSPFOP00000002373BRF1 RNA polymerase III transcription initiation factor subunit b. (701 aa)
gtf2a1General transcription factor IIA, 1. (393 aa)
twistnbUncharacterized protein. (376 aa)
ENSPFOP00000001063Uncharacterized protein. (294 aa)
LOC103130849TAFH domain-containing protein. (921 aa)
taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (306 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
ENSPFOP00000030966Polymerase (RNA) II (DNA directed) polypeptide G-like. (109 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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