STRINGSTRING
polr2i polr2i LOC103145803 LOC103145803 ENSPFOP00000005685 ENSPFOP00000005685 LOC103155672 LOC103155672 LOC103151961 LOC103151961 ENSPFOP00000006365 ENSPFOP00000006365 CYTL1 CYTL1 msx1 msx1 ENSPFOP00000006528 ENSPFOP00000006528 LOC103147853 LOC103147853 ENSPFOP00000006683 ENSPFOP00000006683 ENSPFOP00000006865 ENSPFOP00000006865 ENSPFOP00000006927 ENSPFOP00000006927 LOC103134039 LOC103134039 ELOB ELOB taf2 taf2 ENSPFOP00000007709 ENSPFOP00000007709 pth pth polr2a polr2a LOC103143239 LOC103143239 ENSPFOP00000008518 ENSPFOP00000008518 LOC103145653 LOC103145653 ENSPFOP00000008805 ENSPFOP00000008805 polr2d polr2d LOC103144472 LOC103144472 taf11 taf11 ENSPFOP00000009357 ENSPFOP00000009357 ENSPFOP00000009395 ENSPFOP00000009395 ENSPFOP00000009506 ENSPFOP00000009506 drap1 drap1 atrx atrx TAF4 TAF4 ell2 ell2 ENSPFOP00000010387 ENSPFOP00000010387 LOC103147757 LOC103147757 ENSPFOP00000010724 ENSPFOP00000010724 ENSPFOP00000010827 ENSPFOP00000010827 gtf2f1 gtf2f1 supt6h supt6h ENSPFOP00000011510 ENSPFOP00000011510 taf10 taf10 LOC103153363 LOC103153363 ctr9 ctr9 snapc3 snapc3 ENSPFOP00000011898 ENSPFOP00000011898 polr2j polr2j ADRM1 ADRM1 snapc2 snapc2 ENSPFOP00000012098 ENSPFOP00000012098 ENSPFOP00000012105 ENSPFOP00000012105 ENSPFOP00000012138 ENSPFOP00000012138 ENSPFOP00000012176 ENSPFOP00000012176 etv1 etv1 ENSPFOP00000012455 ENSPFOP00000012455 ENSPFOP00000012539 ENSPFOP00000012539 taf3 taf3 LOC103148202 LOC103148202 rbmx rbmx LOC103139488 LOC103139488 ENSPFOP00000013383 ENSPFOP00000013383 tnfrsf1a tnfrsf1a taf6l taf6l ENSPFOP00000013751 ENSPFOP00000013751 taf7 taf7 ehf ehf LOC103146549 LOC103146549 ENSPFOP00000014349 ENSPFOP00000014349 med18 med18 wdr61 wdr61 taf12 taf12 ENSPFOP00000014564 ENSPFOP00000014564 ENSPFOP00000014582 ENSPFOP00000014582 ENSPFOP00000014619 ENSPFOP00000014619 ENSPFOP00000014732 ENSPFOP00000014732 ENSPFOP00000014830 ENSPFOP00000014830 ENSPFOP00000014865 ENSPFOP00000014865 ENSPFOP00000015203 ENSPFOP00000015203 ENSPFOP00000015509 ENSPFOP00000015509 ercc3 ercc3 gtf2f2 gtf2f2 tmem240 tmem240 LOC103150482 LOC103150482 ENSPFOP00000016222 ENSPFOP00000016222 zbtb1 zbtb1 nr1h4 nr1h4 ENSPFOP00000016355 ENSPFOP00000016355 dr1 dr1 gtf2e2 gtf2e2 scaf1 scaf1 LOC103155270 LOC103155270 polr2b polr2b ENSPFOP00000017193 ENSPFOP00000017193 sqstm1 sqstm1 gtf2b gtf2b LOC103135991 LOC103135991 ENSPFOP00000017637 ENSPFOP00000017637 NKX2-8 NKX2-8 LOC103154103 LOC103154103 leo1 leo1 ENSPFOP00000018214 ENSPFOP00000018214 ssu72 ssu72 ENSPFOP00000018341 ENSPFOP00000018341 eny2 eny2 gsx1 gsx1 LOC103133957 LOC103133957 cdk13 cdk13 LOC103133971 LOC103133971 gtf2h5 gtf2h5 LOC103149412 LOC103149412 ENSPFOP00000019994 ENSPFOP00000019994 ENSPFOP00000020210 ENSPFOP00000020210 taf13 taf13 ENSPFOP00000020773 ENSPFOP00000020773 ENSPFOP00000020774 ENSPFOP00000020774 ENSPFOP00000020811 ENSPFOP00000020811 ENSPFOP00000020988 ENSPFOP00000020988 C5AR2 C5AR2 ENSPFOP00000021076 ENSPFOP00000021076 LOC103150734 LOC103150734 ENSPFOP00000021646 ENSPFOP00000021646 LOC103154070 LOC103154070 LOC103129109 LOC103129109 gtf2h1 gtf2h1 ENSPFOP00000024053 ENSPFOP00000024053 snapc5 snapc5 SMAD4 SMAD4 ENSPFOP00000024829 ENSPFOP00000024829 LOC103130224 LOC103130224 ENSPFOP00000026162 ENSPFOP00000026162 ENSPFOP00000026236 ENSPFOP00000026236 polr2h polr2h ENSPFOP00000026862 ENSPFOP00000026862 ENSPFOP00000027399 ENSPFOP00000027399 ENSPFOP00000027448 ENSPFOP00000027448 LOC103137738 LOC103137738 LOC103134070 LOC103134070 ENSPFOP00000028624 ENSPFOP00000028624 polr2c polr2c ccdc124 ccdc124 ENSPFOP00000030265 ENSPFOP00000030265 ENSPFOP00000030391 ENSPFOP00000030391 ENSPFOP00000030500 ENSPFOP00000030500 ENSPFOP00000030966 ENSPFOP00000030966 edn1 edn1 tcea1 tcea1 paf1 paf1 LOC103131696 LOC103131696 rb1 rb1 polr2l polr2l LOC103149632 LOC103149632 LOC103147066 LOC103147066 ENSPFOP00000004097 ENSPFOP00000004097 mnat1 mnat1 ice2 ice2 GATA2 GATA2 elf3 elf3 ENSPFOP00000003440 ENSPFOP00000003440 eloa eloa phrf1 phrf1 abra abra ENSPFOP00000003217 ENSPFOP00000003217 ELOF1 ELOF1 ENSPFOP00000002819 ENSPFOP00000002819 ENSPFOP00000002806 ENSPFOP00000002806 ENSPFOP00000002792 ENSPFOP00000002792 LOC103153047 LOC103153047 supt16h supt16h ell ell med1 med1 ENSPFOP00000001631 ENSPFOP00000001631 plac8 plac8 gtf2ird1 gtf2ird1 gtf2a1 gtf2a1 ENSPFOP00000001185 ENSPFOP00000001185 pcf11 pcf11 ENSPFOP00000000867 ENSPFOP00000000867 ENSPFOP00000000651 ENSPFOP00000000651 LOC103130849 LOC103130849 taf8 taf8 polr2f polr2f gtf2a2 gtf2a2 POLR2E POLR2E
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC103145803TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (850 aa)
ENSPFOP00000005685RNA polymerase II associated protein 1. (1407 aa)
LOC103155672General transcription factor IIH, polypeptide 2. (255 aa)
LOC103151961ETS domain-containing protein. (492 aa)
ENSPFOP00000006365PCI domain containing 2. (400 aa)
CYTL1Cytokine like 1. (146 aa)
msx1Muscle segment homeobox 1a. (281 aa)
ENSPFOP00000006528Uncharacterized protein. (676 aa)
LOC103147853Si:ch211-13k12.2. (602 aa)
ENSPFOP00000006683Si:ch211-13k12.2. (540 aa)
ENSPFOP00000006865Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (531 aa)
ENSPFOP00000006927Actin binding LIM protein family member 3. (551 aa)
LOC103134039Muscle segment homeobox 3. (247 aa)
ELOBElongin B. (119 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1219 aa)
ENSPFOP00000007709TFIIF_beta domain-containing protein. (140 aa)
pthUncharacterized protein. (108 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1907 aa)
LOC103143239Actin binding Rho activating protein a. (359 aa)
ENSPFOP00000008518General transcription factor IIE, polypeptide 1, alpha. (463 aa)
LOC103145653TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (637 aa)
ENSPFOP00000008805GCM domain-containing protein. (447 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
LOC103144472Ash1 (absent, small, or homeotic)-like (Drosophila). (2933 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (208 aa)
ENSPFOP00000009357Protein S100; Belongs to the S-100 family. (113 aa)
ENSPFOP00000009395Homeobox domain-containing protein. (333 aa)
ENSPFOP00000009506Transcription elongation factor A (SII), 3. (540 aa)
drap1DR1-associated protein 1 (negative cofactor 2 alpha). (231 aa)
atrxUncharacterized protein. (2113 aa)
TAF4TATA-box binding protein associated factor 4. (856 aa)
ell2Elongation factor, RNA polymerase II, 2. (672 aa)
ENSPFOP00000010387Uncharacterized protein. (1165 aa)
LOC103147757Uncharacterized protein. (363 aa)
ENSPFOP00000010724Fibronectin type-III domain-containing protein. (637 aa)
ENSPFOP00000010827TBP-like 1. (126 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
supt6hTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1753 aa)
ENSPFOP00000011510Transcription elongation factor SPT5. (1004 aa)
taf10TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
LOC103153363Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Belongs to the ELL/occludin family. (546 aa)
ctr9CTR9 homolog, Paf1/RNA polymerase II complex component. (1154 aa)
snapc3Small nuclear RNA activating complex, polypeptide 3. (380 aa)
ENSPFOP00000011898RTF1 homolog, Paf1/RNA polymerase II complex component. (664 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (118 aa)
ADRM1Adhesion regulating molecule 1. (414 aa)
snapc2Uncharacterized protein. (455 aa)
ENSPFOP00000012098PR domain containing 4. (766 aa)
ENSPFOP00000012105Adhesion regulating molecule 1. (422 aa)
ENSPFOP00000012138BZIP domain-containing protein. (280 aa)
ENSPFOP00000012176Nuclear factor of activated T cells 4. (368 aa)
etv1Ets variant 1. (533 aa)
ENSPFOP00000012455General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (468 aa)
ENSPFOP00000012539NK2 homeobox 3. (332 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (942 aa)
LOC103148202Transcription elongation factor A (SII), 2. (319 aa)
rbmxRNA binding motif protein X-linked. (383 aa)
LOC103139488Nuclear factor of activated T cells 5b. (1345 aa)
ENSPFOP00000013383Elongin B. (118 aa)
tnfrsf1aTumor necrosis factor receptor superfamily, member 1a. (379 aa)
taf6lTAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (646 aa)
ENSPFOP00000013751Uncharacterized protein. (276 aa)
taf7TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (362 aa)
ehfEts homologous factor. (274 aa)
LOC103146549Helicase-like transcription factor. (961 aa)
ENSPFOP00000014349TAFH domain-containing protein. (953 aa)
med18Mediator of RNA polymerase II transcription subunit 18; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (209 aa)
wdr61WD repeat domain 61. (305 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (131 aa)
ENSPFOP00000014564E1A binding protein p300 b. (2474 aa)
ENSPFOP00000014582X-box binding protein 1. (387 aa)
ENSPFOP00000014619B30.2/SPRY domain-containing protein. (689 aa)
ENSPFOP00000014732TAFH domain-containing protein. (1080 aa)
ENSPFOP00000014830TATA box binding protein. (315 aa)
ENSPFOP00000014865Uncharacterized protein. (54 aa)
ENSPFOP00000015203General transcription factor IIA, 1-like. (430 aa)
ENSPFOP00000015509GATA binding protein 1a. (427 aa)
ercc3Excision repair cross-complementation group 3. (780 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (312 aa)
tmem240Transmembrane protein 240a. (175 aa)
LOC103150482Nuclear receptor subfamily 1, group H, member 5. (492 aa)
ENSPFOP00000016222LIM homeobox 1a. (381 aa)
zbtb1Zinc finger and BTB domain containing 1. (680 aa)
nr1h4Nuclear receptor subfamily 1, group H, member 4. (485 aa)
ENSPFOP00000016355DEAD (Asp-Glu-Ala-Asp) box helicase 21. (792 aa)
dr1Down-regulator of transcription 1. (176 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
scaf1SR-related CTD-associated factor 1. (1358 aa)
LOC103155270Uncharacterized protein. (627 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
ENSPFOP00000017193Excision repair cross-complementation group 2. (760 aa)
sqstm1Sequestosome 1. (463 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
LOC103135991Uncharacterized protein. (599 aa)
ENSPFOP00000017637Nuclear factor of activated T cells 5a. (1314 aa)
NKX2-8NK2 homeobox 8. (231 aa)
LOC103154103Uncharacterized protein. (370 aa)
leo1LEO1 homolog, Paf1/RNA polymerase II complex component. (631 aa)
ENSPFOP00000018214General transcription factor IIH, polypeptide 3. (303 aa)
ssu72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
ENSPFOP00000018341Uncharacterized protein. (194 aa)
eny2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (95 aa)
gsx1GS homeobox 1. (243 aa)
LOC103133957Androgen receptor. (755 aa)
cdk13Cyclin-dependent kinase 13. (1409 aa)
LOC103133971Uncharacterized protein. (1900 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
LOC103149412Mothers against decapentaplegic homolog. (503 aa)
ENSPFOP00000019994Mothers against decapentaplegic homolog. (511 aa)
ENSPFOP00000020210BZIP domain-containing protein. (226 aa)
taf13TATA-box binding protein associated factor 13. (125 aa)
ENSPFOP00000020773BZIP domain-containing protein. (570 aa)
ENSPFOP00000020774Nuclear factor, interleukin 3 regulated, member 6. (396 aa)
ENSPFOP00000020811Nuclear factor, interleukin 3 regulated, member 5. (609 aa)
ENSPFOP00000020988Si:dkey-29b11.3. (164 aa)
C5AR2Complement component 5a receptor 2. (350 aa)
ENSPFOP00000021076CCAAT enhancer binding protein beta. (287 aa)
LOC103150734Ataxin 1-like. (824 aa)
ENSPFOP00000021646Uncharacterized protein. (130 aa)
LOC103154070Uncharacterized protein. (130 aa)
LOC103129109CBFD_NFYB_HMF domain-containing protein. (206 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
ENSPFOP00000024053Nuclear factor, interleukin 3 regulated. (335 aa)
snapc5Small nuclear RNA activating complex, polypeptide 5. (118 aa)
SMAD4Mothers against decapentaplegic homolog. (510 aa)
ENSPFOP00000024829Cyclin-dependent kinase 12. (1283 aa)
LOC103130224CBFD_NFYB_HMF domain-containing protein. (206 aa)
ENSPFOP00000026162Serum response factor b. (601 aa)
ENSPFOP00000026236Uncharacterized protein. (253 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSPFOP00000026862Uncharacterized protein. (176 aa)
ENSPFOP00000027399Uncharacterized protein. (1912 aa)
ENSPFOP00000027448SAP domain-containing protein. (962 aa)
LOC103137738Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
LOC103134070Elongin A, like. (658 aa)
ENSPFOP00000028624Uncharacterized protein. (984 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
ccdc124Coiled-coil domain containing 124. (220 aa)
ENSPFOP00000030265Uncharacterized protein. (171 aa)
ENSPFOP00000030391MADS-box domain-containing protein. (378 aa)
ENSPFOP00000030500Nuclear factor of activated T cells 2a. (520 aa)
ENSPFOP00000030966Polymerase (RNA) II (DNA directed) polypeptide G-like. (109 aa)
edn1Endothelin 1. (187 aa)
tcea1Transcription elongation factor A (SII), 1. (311 aa)
paf1PAF1 homolog, Paf1/RNA polymerase II complex component. (530 aa)
LOC103131696Actin binding LIM protein family, member 3. (586 aa)
rb1Retinoblastoma 1. (913 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC103149632Ets variant 7. (403 aa)
LOC103147066B30.2/SPRY domain-containing protein. (708 aa)
ENSPFOP00000004097Uncharacterized protein. (181 aa)
mnat1MNAT1 component of CDK activating kinase. (308 aa)
ice2Interactor of little elongator complex ELL subunit 2. (909 aa)
GATA2GATA binding protein 2. (462 aa)
elf3E74-like factor 3 (ets domain transcription factor, epithelial-specific ). (382 aa)
ENSPFOP00000003440TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1725 aa)
eloaElongin A. (687 aa)
phrf1PHD and ring finger domains 1. (1727 aa)
abraActin binding Rho activating protein b. (407 aa)
ENSPFOP00000003217GATA binding protein 2a. (435 aa)
ELOF1Transcription elongation factor 1 homolog; Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions. Belongs to the ELOF1 family. (83 aa)
ENSPFOP00000002819Cyclin H; Belongs to the cyclin family. (334 aa)
ENSPFOP00000002806TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (252 aa)
ENSPFOP00000002792Cyclin H; Belongs to the cyclin family. (321 aa)
LOC103153047Zgc:154006. (517 aa)
supt16hSPT16 homolog, facilitates chromatin remodeling subunit. (1030 aa)
ellElongation factor RNA polymerase II. (645 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1793 aa)
ENSPFOP00000001631SET domain containing 2, histone lysine methyltransferase. (2362 aa)
plac8Placenta associated 8, tandem duplicate 1. (104 aa)
gtf2ird1GTF2I repeat domain containing 1. (1001 aa)
gtf2a1General transcription factor IIA, 1. (393 aa)
ENSPFOP00000001185HTH_Tnp_Tc3_2 domain-containing protein. (159 aa)
pcf11PCF11 cleavage and polyadenylation factor subunit. (1625 aa)
ENSPFOP00000000867Nuclear factor of activated T cells 2a. (848 aa)
ENSPFOP00000000651NK2 homeobox 5. (313 aa)
LOC103130849TAFH domain-containing protein. (921 aa)
taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (306 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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