13 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103137288	Translocated promoter region b, nuclear basket protein. (2358 aa)
	ENSPFOP00000013288	Nucleoporin 153. (1456 aa)
	ENSPFOP00000010929	Nucleoporin 205. (2030 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
	tpr	Translocated promoter region a, nuclear basket protein. (2481 aa)
	nup98	Nucleoporin 98. (1820 aa)
	ENSPFOP00000003297	ELYS domain-containing protein. (152 aa)
	nup54	Uncharacterized protein. (566 aa)
	ENSPFOP00000001377	POM121 transmembrane nucleoporin. (1138 aa)
	ndc1	NDC1 transmembrane nucleoporin. (669 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (296 aa)
	ahctf1	AT hook containing transcription factor 1. (2487 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000001377	ENSPFOP00000003297	ENSPFOP00000001377	ENSPFOP00000003297	POM121 transmembrane nucleoporin.	ELYS domain-containing protein.	0.617
ENSPFOP00000001377	ENSPFOP00000010929	ENSPFOP00000001377	ENSPFOP00000010929	POM121 transmembrane nucleoporin.	Nucleoporin 205.	0.701
ENSPFOP00000001377	ENSPFOP00000013288	ENSPFOP00000001377	ENSPFOP00000013288	POM121 transmembrane nucleoporin.	Nucleoporin 153.	0.782
ENSPFOP00000001377	ahctf1	ENSPFOP00000001377	ENSPFOP00000016692	POM121 transmembrane nucleoporin.	AT hook containing transcription factor 1.	0.617
ENSPFOP00000001377	nup35	ENSPFOP00000001377	ENSPFOP00000009995	POM121 transmembrane nucleoporin.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.686
ENSPFOP00000001377	nup93	ENSPFOP00000001377	ENSPFOP00000013150	POM121 transmembrane nucleoporin.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.744
ENSPFOP00000001377	nup98	ENSPFOP00000001377	ENSPFOP00000000406	POM121 transmembrane nucleoporin.	Nucleoporin 98.	0.705
ENSPFOP00000003297	ENSPFOP00000001377	ENSPFOP00000003297	ENSPFOP00000001377	ELYS domain-containing protein.	POM121 transmembrane nucleoporin.	0.617
ENSPFOP00000003297	ENSPFOP00000010929	ENSPFOP00000003297	ENSPFOP00000010929	ELYS domain-containing protein.	Nucleoporin 205.	0.960
ENSPFOP00000003297	ENSPFOP00000013288	ENSPFOP00000003297	ENSPFOP00000013288	ELYS domain-containing protein.	Nucleoporin 153.	0.594
ENSPFOP00000003297	ndc1	ENSPFOP00000003297	ENSPFOP00000010847	ELYS domain-containing protein.	NDC1 transmembrane nucleoporin.	0.877
ENSPFOP00000003297	nup35	ENSPFOP00000003297	ENSPFOP00000009995	ELYS domain-containing protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.958
ENSPFOP00000003297	nup54	ENSPFOP00000003297	ENSPFOP00000004165	ELYS domain-containing protein.	Uncharacterized protein.	0.805
ENSPFOP00000003297	nup93	ENSPFOP00000003297	ENSPFOP00000013150	ELYS domain-containing protein.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.961
ENSPFOP00000003297	nup98	ENSPFOP00000003297	ENSPFOP00000000406	ELYS domain-containing protein.	Nucleoporin 98.	0.968
ENSPFOP00000003297	seh1l	ENSPFOP00000003297	ENSPFOP00000026082	ELYS domain-containing protein.	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.	0.967
ENSPFOP00000010929	ENSPFOP00000001377	ENSPFOP00000010929	ENSPFOP00000001377	Nucleoporin 205.	POM121 transmembrane nucleoporin.	0.701
ENSPFOP00000010929	ENSPFOP00000003297	ENSPFOP00000010929	ENSPFOP00000003297	Nucleoporin 205.	ELYS domain-containing protein.	0.960
ENSPFOP00000010929	ENSPFOP00000013288	ENSPFOP00000010929	ENSPFOP00000013288	Nucleoporin 205.	Nucleoporin 153.	0.995
ENSPFOP00000010929	LOC103137288	ENSPFOP00000010929	ENSPFOP00000014127	Nucleoporin 205.	Translocated promoter region b, nuclear basket protein.	0.892