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gar1 gar1 dkc1 dkc1 nhp2 nhp2 LOC103156947 LOC103156947 pot1 pot1 tert tert ENSPFOP00000014735 ENSPFOP00000014735 LOC103141173 LOC103141173 RPA1 RPA1 ptges3 ptges3 pinx1 pinx1 wrap53 wrap53 rpa1 rpa1 nop10 nop10 rad50 rad50
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gar1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (211 aa)
dkc1Dyskeratosis congenita 1, dyskerin. (500 aa)
nhp2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (156 aa)
LOC103156947Uncharacterized protein. (484 aa)
pot1Telo_bind domain-containing protein. (832 aa)
tertTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1086 aa)
ENSPFOP00000014735TEL2, telomere maintenance 2, homolog (S. cerevisiae). (821 aa)
LOC103141173Prostaglandin E synthase 3a (cytosolic). (171 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (591 aa)
ptges3Prostaglandin E synthase 3b (cytosolic). (157 aa)
pinx1PIN2 (TERF1) interacting telomerase inhibitor 1. (363 aa)
wrap53WD repeat containing, antisense to TP53. (553 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (600 aa)
nop10NOP10 ribonucleoprotein homolog (yeast). (64 aa)
rad50RAD50 homolog, double strand break repair protein. (1312 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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