(24 nodes) Regulation of dopamine secretion network (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPFOP00000024211	Synuclein, gamma b (breast cancer-specific protein 1); Belongs to the synuclein family. (228 aa)
	ENSPFOP00000024634	Uncharacterized protein. (128 aa)
	LOC103141308	Synaptotagmin VIIa. (572 aa)
	ENSPFOP00000015413	C2 domain-containing protein. (378 aa)
	LOC103136545	Synaptotagmin IXa. (559 aa)
	syt1	Synaptotagmin Ia. (422 aa)
	ENSPFOP00000017921	Synaptotagmin X. (541 aa)
	LOC103133801	Synaptotagmin Ib. (407 aa)
	LOC103134608	Uncharacterized protein. (431 aa)
	dtnbp1	Dystrobrevin binding protein 1b. (227 aa)
	LOC103132594	Synaptotagmin Vb. (424 aa)
	ENSPFOP00000014072	Synaptotagmin XII. (426 aa)
	ENSPFOP00000014007	Synaptotagmin XV. (416 aa)
	sncg	Gamma-synuclein; Belongs to the synuclein family. (112 aa)
	syt3	Synaptotagmin III. (558 aa)
	LOC103142753	Uncharacterized protein; Belongs to the synuclein family. (127 aa)
	drd3	Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family. (455 aa)
	syt9	Synaptotagmin IXb. (526 aa)
	pink1	PTEN induced kinase 1. (575 aa)
	LOC103144025	Synaptotagmin IIa. (427 aa)
	LOC103150978	Synaptotagmin VIa. (418 aa)
	ENSPFOP00000004315	Synaptotagmin VIIb. (563 aa)
	syt11	Synaptotagmin XIb. (468 aa)
	ENSPFOP00000003448	Synaptotagmin IV. (447 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000003448	LOC103132594	ENSPFOP00000003448	ENSPFOP00000014099	Synaptotagmin IV.	Synaptotagmin Vb.	0.742
ENSPFOP00000003448	LOC103133801	ENSPFOP00000003448	ENSPFOP00000019206	Synaptotagmin IV.	Synaptotagmin Ib.	0.742
ENSPFOP00000003448	LOC103134608	ENSPFOP00000003448	ENSPFOP00000014739	Synaptotagmin IV.	Uncharacterized protein.	0.742
ENSPFOP00000003448	LOC103136545	ENSPFOP00000003448	ENSPFOP00000017500	Synaptotagmin IV.	Synaptotagmin IXa.	0.575
ENSPFOP00000003448	LOC103144025	ENSPFOP00000003448	ENSPFOP00000007816	Synaptotagmin IV.	Synaptotagmin IIa.	0.742
ENSPFOP00000003448	syt1	ENSPFOP00000003448	ENSPFOP00000017818	Synaptotagmin IV.	Synaptotagmin Ia.	0.755
ENSPFOP00000003448	syt9	ENSPFOP00000003448	ENSPFOP00000009894	Synaptotagmin IV.	Synaptotagmin IXb.	0.575
ENSPFOP00000015413	LOC103132594	ENSPFOP00000015413	ENSPFOP00000014099	C2 domain-containing protein.	Synaptotagmin Vb.	0.742
ENSPFOP00000015413	LOC103133801	ENSPFOP00000015413	ENSPFOP00000019206	C2 domain-containing protein.	Synaptotagmin Ib.	0.742
ENSPFOP00000015413	LOC103134608	ENSPFOP00000015413	ENSPFOP00000014739	C2 domain-containing protein.	Uncharacterized protein.	0.742
ENSPFOP00000015413	LOC103136545	ENSPFOP00000015413	ENSPFOP00000017500	C2 domain-containing protein.	Synaptotagmin IXa.	0.575
ENSPFOP00000015413	LOC103144025	ENSPFOP00000015413	ENSPFOP00000007816	C2 domain-containing protein.	Synaptotagmin IIa.	0.742
ENSPFOP00000015413	syt1	ENSPFOP00000015413	ENSPFOP00000017818	C2 domain-containing protein.	Synaptotagmin Ia.	0.745
ENSPFOP00000015413	syt9	ENSPFOP00000015413	ENSPFOP00000009894	C2 domain-containing protein.	Synaptotagmin IXb.	0.575
ENSPFOP00000024211	pink1	ENSPFOP00000024211	ENSPFOP00000007937	Synuclein, gamma b (breast cancer-specific protein 1); Belongs to the synuclein family.	PTEN induced kinase 1.	0.549
LOC103132594	ENSPFOP00000003448	ENSPFOP00000014099	ENSPFOP00000003448	Synaptotagmin Vb.	Synaptotagmin IV.	0.742
LOC103132594	ENSPFOP00000015413	ENSPFOP00000014099	ENSPFOP00000015413	Synaptotagmin Vb.	C2 domain-containing protein.	0.742
LOC103132594	LOC103136545	ENSPFOP00000014099	ENSPFOP00000017500	Synaptotagmin Vb.	Synaptotagmin IXa.	0.600
LOC103132594	syt11	ENSPFOP00000014099	ENSPFOP00000003481	Synaptotagmin Vb.	Synaptotagmin XIb.	0.742
LOC103132594	syt9	ENSPFOP00000014099	ENSPFOP00000009894	Synaptotagmin Vb.	Synaptotagmin IXb.	0.600