STRINGSTRING
tpr tpr nup188 nup188 nup54 nup54 LOC103138818 LOC103138818 ENSPFOP00000001377 ENSPFOP00000001377 nup98 nup98 nup155 nup155 nup107 nup107 nup210 nup210 LOC103135165 LOC103135165 LOC103137288 LOC103137288 ENSPFOP00000013288 ENSPFOP00000013288 nup93 nup93 NUP62 NUP62 nup133 nup133 nup85 nup85 nup88 nup88 FANCA FANCA ENSPFOP00000010929 ENSPFOP00000010929 ndc1 ndc1 NUP214 NUP214 nup35 nup35 nup58 nup58 nutf2 nutf2 nup160 nup160
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tprTranslocated promoter region a, nuclear basket protein. (2481 aa)
nup188Nucleoporin 188. (1749 aa)
nup54Uncharacterized protein. (566 aa)
LOC103138818Si:ch211-216l23.2. (429 aa)
ENSPFOP00000001377POM121 transmembrane nucleoporin. (1138 aa)
nup98Nucleoporin 98. (1820 aa)
nup155Nucleoporin 155. (1367 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (902 aa)
nup210Nucleoporin 210. (1880 aa)
LOC103135165NTF2 domain-containing protein. (130 aa)
LOC103137288Translocated promoter region b, nuclear basket protein. (2358 aa)
ENSPFOP00000013288Nucleoporin 153. (1456 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
NUP62Nucleoporin 62. (553 aa)
nup133Nucleoporin 133. (1116 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
nup88Nucleoporin 88. (713 aa)
FANCAFA complementation group A. (1359 aa)
ENSPFOP00000010929Nucleoporin 205. (2030 aa)
ndc1NDC1 transmembrane nucleoporin. (669 aa)
NUP214Nucleoporin 214. (1694 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (296 aa)
nup58Nucleoporin 58. (594 aa)
nutf2Nuclear transport factor 2. (127 aa)
nup160Nucleoporin 160. (1396 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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