19 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPFOP00000023566	YEATS domain containing 2. (1259 aa)
	tada2a	Transcriptional adapter. (445 aa)
	pink1	PTEN induced kinase 1. (575 aa)
	LOC103138626-2	Jun dimerization protein 2-like. (163 aa)
	JDP2	Jun dimerization protein 2. (274 aa)
	LOC103138264	Transforming growth factor beta; Belongs to the TGF-beta family. (380 aa)
	dr1	Down-regulator of transcription 1. (176 aa)
	ENSPFOP00000017693	MAP3K12 binding inhibitory protein 1. (336 aa)
	kat14	Lysine acetyltransferase 14. (762 aa)
	ENSPFOP00000000909	Zinc finger, ZZ-type containing 3. (887 aa)
	ENSPFOP00000004019	Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (310 aa)
	LOC103146721	Zinc finger protein 703. (579 aa)
	rrp8	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (548 aa)
	LOC103138626	BZIP domain-containing protein. (163 aa)
	ucn	Urotensin 1. (147 aa)
	sgf29	SAGA complex associated factor 29. (293 aa)
	sap30bp	SAP30 binding protein. (304 aa)
	sirt1	Sirtuin 1. (677 aa)
	ENSPFOP00000011880	Leucine-rich repeat kinase 2. (1882 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000000909	ENSPFOP00000017693	ENSPFOP00000000909	ENSPFOP00000017693	Zinc finger, ZZ-type containing 3.	MAP3K12 binding inhibitory protein 1.	0.940
ENSPFOP00000000909	ENSPFOP00000023566	ENSPFOP00000000909	ENSPFOP00000023566	Zinc finger, ZZ-type containing 3.	YEATS domain containing 2.	0.922
ENSPFOP00000000909	dr1	ENSPFOP00000000909	ENSPFOP00000016453	Zinc finger, ZZ-type containing 3.	Down-regulator of transcription 1.	0.876
ENSPFOP00000000909	kat14	ENSPFOP00000000909	ENSPFOP00000018419	Zinc finger, ZZ-type containing 3.	Lysine acetyltransferase 14.	0.980
ENSPFOP00000000909	sgf29	ENSPFOP00000000909	ENSPFOP00000010049	Zinc finger, ZZ-type containing 3.	SAGA complex associated factor 29.	0.996
ENSPFOP00000000909	tada2a	ENSPFOP00000000909	ENSPFOP00000008986	Zinc finger, ZZ-type containing 3.	Transcriptional adapter.	0.970
ENSPFOP00000011880	pink1	ENSPFOP00000011880	ENSPFOP00000007937	Leucine-rich repeat kinase 2.	PTEN induced kinase 1.	0.506
ENSPFOP00000017693	ENSPFOP00000000909	ENSPFOP00000017693	ENSPFOP00000000909	MAP3K12 binding inhibitory protein 1.	Zinc finger, ZZ-type containing 3.	0.940
ENSPFOP00000017693	ENSPFOP00000023566	ENSPFOP00000017693	ENSPFOP00000023566	MAP3K12 binding inhibitory protein 1.	YEATS domain containing 2.	0.953
ENSPFOP00000017693	dr1	ENSPFOP00000017693	ENSPFOP00000016453	MAP3K12 binding inhibitory protein 1.	Down-regulator of transcription 1.	0.951
ENSPFOP00000017693	kat14	ENSPFOP00000017693	ENSPFOP00000018419	MAP3K12 binding inhibitory protein 1.	Lysine acetyltransferase 14.	0.926
ENSPFOP00000017693	sgf29	ENSPFOP00000017693	ENSPFOP00000010049	MAP3K12 binding inhibitory protein 1.	SAGA complex associated factor 29.	0.917
ENSPFOP00000017693	tada2a	ENSPFOP00000017693	ENSPFOP00000008986	MAP3K12 binding inhibitory protein 1.	Transcriptional adapter.	0.937
ENSPFOP00000023566	ENSPFOP00000000909	ENSPFOP00000023566	ENSPFOP00000000909	YEATS domain containing 2.	Zinc finger, ZZ-type containing 3.	0.922
ENSPFOP00000023566	ENSPFOP00000017693	ENSPFOP00000023566	ENSPFOP00000017693	YEATS domain containing 2.	MAP3K12 binding inhibitory protein 1.	0.953
ENSPFOP00000023566	dr1	ENSPFOP00000023566	ENSPFOP00000016453	YEATS domain containing 2.	Down-regulator of transcription 1.	0.962
ENSPFOP00000023566	kat14	ENSPFOP00000023566	ENSPFOP00000018419	YEATS domain containing 2.	Lysine acetyltransferase 14.	0.981
ENSPFOP00000023566	sgf29	ENSPFOP00000023566	ENSPFOP00000010049	YEATS domain containing 2.	SAGA complex associated factor 29.	0.975
ENSPFOP00000023566	tada2a	ENSPFOP00000023566	ENSPFOP00000008986	YEATS domain containing 2.	Transcriptional adapter.	0.956
JDP2	sirt1	ENSPFOP00000015056	ENSPFOP00000010381	Jun dimerization protein 2.	Sirtuin 1.	0.580