STRINGSTRING
otud3 otud3 LOC103134639 LOC103134639 otud7a otud7a vcpip1 vcpip1 otud7b otud7b usp30 usp30 tnfaip3 tnfaip3 usp37 usp37 LOC103134641 LOC103134641
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
otud3OTU deubiquitinase 3. (358 aa)
LOC103134639Ubiquitin thioesterase OTU1. (300 aa)
otud7aOTU deubiquitinase 7A. (956 aa)
vcpip1Valosin containing protein (p97)/p47 complex interacting protein 1. (1158 aa)
otud7bOTU deubiquitinase 7B. (912 aa)
usp30Ubiquitin carboxyl-terminal hydrolase. (508 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (824 aa)
usp37Ubiquitin carboxyl-terminal hydrolase. (952 aa)
LOC103134641YOD1 deubiquitinase. (300 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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