(11 nodes) Nuclear pore nuclear basket network (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ranbp2	RAN binding protein 2. (3082 aa)
	LOC103155071	MAD2 mitotic arrest deficient-like 1 (yeast). (236 aa)
	tpr	Translocated promoter region a, nuclear basket protein. (2481 aa)
	ENSPFOP00000017250	annotation not available (167 aa)
	nup98	Nucleoporin 98. (1820 aa)
	ENSPFOP00000013080	Minichromosome maintenance complex component 3 associated protein. (1950 aa)
	LOC103137288	Translocated promoter region b, nuclear basket protein. (2358 aa)
	ENSPFOP00000017245	Uncharacterized protein. (168 aa)
	ENSPFOP00000013288	Nucleoporin 153. (1456 aa)
	ENSPFOP00000011961	Mitotic arrest deficient 1 like 1. (676 aa)
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (296 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000011961	ENSPFOP00000013080	ENSPFOP00000011961	ENSPFOP00000013080	Mitotic arrest deficient 1 like 1.	Minichromosome maintenance complex component 3 associated protein.	0.422
ENSPFOP00000011961	LOC103137288	ENSPFOP00000011961	ENSPFOP00000014127	Mitotic arrest deficient 1 like 1.	Translocated promoter region b, nuclear basket protein.	0.727
ENSPFOP00000011961	LOC103155071	ENSPFOP00000011961	ENSPFOP00000000493	Mitotic arrest deficient 1 like 1.	MAD2 mitotic arrest deficient-like 1 (yeast).	0.999
ENSPFOP00000011961	tpr	ENSPFOP00000011961	ENSPFOP00000006667	Mitotic arrest deficient 1 like 1.	Translocated promoter region a, nuclear basket protein.	0.727
ENSPFOP00000013080	ENSPFOP00000011961	ENSPFOP00000013080	ENSPFOP00000011961	Minichromosome maintenance complex component 3 associated protein.	Mitotic arrest deficient 1 like 1.	0.422
ENSPFOP00000013080	ENSPFOP00000013288	ENSPFOP00000013080	ENSPFOP00000013288	Minichromosome maintenance complex component 3 associated protein.	Nucleoporin 153.	0.816
ENSPFOP00000013080	ENSPFOP00000017245	ENSPFOP00000013080	ENSPFOP00000017245	Minichromosome maintenance complex component 3 associated protein.	Uncharacterized protein.	0.944
ENSPFOP00000013080	ENSPFOP00000017250	ENSPFOP00000013080	ENSPFOP00000017250	Minichromosome maintenance complex component 3 associated protein.	annotation not available	0.944
ENSPFOP00000013080	LOC103137288	ENSPFOP00000013080	ENSPFOP00000014127	Minichromosome maintenance complex component 3 associated protein.	Translocated promoter region b, nuclear basket protein.	0.647
ENSPFOP00000013080	nup98	ENSPFOP00000013080	ENSPFOP00000000406	Minichromosome maintenance complex component 3 associated protein.	Nucleoporin 98.	0.654
ENSPFOP00000013080	tpr	ENSPFOP00000013080	ENSPFOP00000006667	Minichromosome maintenance complex component 3 associated protein.	Translocated promoter region a, nuclear basket protein.	0.647
ENSPFOP00000013288	ENSPFOP00000013080	ENSPFOP00000013288	ENSPFOP00000013080	Nucleoporin 153.	Minichromosome maintenance complex component 3 associated protein.	0.816
ENSPFOP00000013288	ENSPFOP00000017245	ENSPFOP00000013288	ENSPFOP00000017245	Nucleoporin 153.	Uncharacterized protein.	0.648
ENSPFOP00000013288	ENSPFOP00000017250	ENSPFOP00000013288	ENSPFOP00000017250	Nucleoporin 153.	annotation not available	0.648
ENSPFOP00000013288	LOC103137288	ENSPFOP00000013288	ENSPFOP00000014127	Nucleoporin 153.	Translocated promoter region b, nuclear basket protein.	0.946
ENSPFOP00000013288	nup35	ENSPFOP00000013288	ENSPFOP00000009995	Nucleoporin 153.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.983
ENSPFOP00000013288	nup98	ENSPFOP00000013288	ENSPFOP00000000406	Nucleoporin 153.	Nucleoporin 98.	0.990
ENSPFOP00000013288	ranbp2	ENSPFOP00000013288	ENSPFOP00000007571	Nucleoporin 153.	RAN binding protein 2.	0.999
ENSPFOP00000013288	tpr	ENSPFOP00000013288	ENSPFOP00000006667	Nucleoporin 153.	Translocated promoter region a, nuclear basket protein.	0.946
ENSPFOP00000017245	ENSPFOP00000013080	ENSPFOP00000017245	ENSPFOP00000013080	Uncharacterized protein.	Minichromosome maintenance complex component 3 associated protein.	0.944