STRINGSTRING
sorl1 sorl1 VPS13A VPS13A ENSPFOP00000003740 ENSPFOP00000003740 golph3 golph3 ENSPFOP00000025984 ENSPFOP00000025984 ENSPFOP00000023425 ENSPFOP00000023425 LOC103131732 LOC103131732 ENSPFOP00000019057 ENSPFOP00000019057
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
sorl1Sortilin_C domain-containing protein. (996 aa)
VPS13AVacuolar protein sorting 13 homolog A. (3266 aa)
ENSPFOP00000003740Vacuolar protein sorting 13 homolog D. (4398 aa)
golph3Si:dkey-27b3.2. (294 aa)
ENSPFOP00000025984Uncharacterized protein. (167 aa)
ENSPFOP00000023425Vacuolar protein sorting 13 homolog A. (2816 aa)
LOC103131732Uncharacterized protein. (478 aa)
ENSPFOP00000019057Vacuolar protein sorting 13 homolog C. (3062 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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