54 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103156558	Thymine DNA glycosylase, tandem duplicate 2. (420 aa)
	ENSPFOP00000000909	Zinc finger, ZZ-type containing 3. (887 aa)
	LOC103149606	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (391 aa)
	LOC103131877	Uncharacterized protein. (215 aa)
	bag6	BCL2 associated athanogene 6. (1207 aa)
	lama4	Laminin, alpha 4. (1851 aa)
	ENSPFOP00000002066	WD repeat containing planar cell polarity effector. (643 aa)
	uchl5	Ubiquitin carboxyl-terminal hydrolase. (329 aa)
	LYPD6	LY6/PLAUR domain containing 6. (169 aa)
	ENSPFOP00000003418	Si:ch1073-416j23.1. (648 aa)
	wnt2b	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (384 aa)
	poglut1	Protein O-glucosyltransferase 1. (385 aa)
	noct	Nocturnin. (445 aa)
	LAMA3	Uncharacterized protein. (2335 aa)
	LOC103139544	Uncharacterized protein. (629 aa)
	ENSPFOP00000008191	Receptor for activated C kinase 1. (323 aa)
	ENSPFOP00000008511	Uncharacterized protein. (311 aa)
	tfpt	TCF3 (E2A) fusion partner. (199 aa)
	mcrs1	Microspherule protein 1. (471 aa)
	tada2a	Transcriptional adapter. (445 aa)
	LOC103129995	Dystroglycan 1. (892 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1062 aa)
	LOC103145666	Pleckstrin homology-like domain, family B, member 1a. (1349 aa)
	sgf29	SAGA complex associated factor 29. (293 aa)
	racgap1	Rac GTPase activating protein 1. (630 aa)
	sfrp2	Secreted frizzled-related protein 2. (295 aa)
	cactin	Cactin. (852 aa)
	ENSPFOP00000012889	Laminin, alpha 5. (3760 aa)
	ENSPFOP00000013503	INO80 complex ATPase subunit. (1568 aa)
	trip12	Thyroid hormone receptor interactor 12. (2058 aa)
	nfe2l2	Nuclear factor, erythroid 2-like 2a. (617 aa)
	ccsap	Centriole, cilia and spindle-associated protein b. (279 aa)
	rbm19	RNA binding motif protein 19. (920 aa)
	ENSPFOP00000015495	INO80 complex subunit Da. (1001 aa)
	ino80e	INO80 complex subunit E. (256 aa)
	ENSPFOP00000016222	LIM homeobox 1a. (381 aa)
	dr1	Down-regulator of transcription 1. (176 aa)
	ENSPFOP00000016494	Uncharacterized protein. (1365 aa)
	LOC103156561	Thymine DNA glycosylase, tandem duplicate 1. (462 aa)
	ENSPFOP00000017693	MAP3K12 binding inhibitory protein 1. (336 aa)
	LAMA2	Laminin subunit alpha 2. (2464 aa)
	kat14	Lysine acetyltransferase 14. (762 aa)
	ENSPFOP00000019074	Homeobox domain-containing protein. (177 aa)
	phldb2	Pleckstrin homology-like domain, family B, member 2a. (1029 aa)
	RAB14	RAB14, member RAS oncogene family. (216 aa)
	LOC103143784	G protein-coupled estrogen receptor 1; Belongs to the G-protein coupled receptor 1 family. (352 aa)
	ENSPFOP00000021797	Pleckstrin homology-like domain, family B, member 1b. (1456 aa)
	ENSPFOP00000022116	Uncharacterized protein. (583 aa)
	nfrkb	Nuclear factor related to kappaB binding protein. (1277 aa)
	LOC103132691	Endo/exonuclease/phosphatase domain-containing protein. (452 aa)
	ENSPFOP00000023566	YEATS domain containing 2. (1259 aa)
	LOC103141828	Peptidase S72 domain-containing protein. (907 aa)
	LOC103136649	R-spondin 3. (290 aa)
	ENSPFOP00000026825	Uncharacterized protein. (1652 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000000909	ENSPFOP00000008191	ENSPFOP00000000909	ENSPFOP00000008191	Zinc finger, ZZ-type containing 3.	Receptor for activated C kinase 1.	0.434
ENSPFOP00000000909	ENSPFOP00000017693	ENSPFOP00000000909	ENSPFOP00000017693	Zinc finger, ZZ-type containing 3.	MAP3K12 binding inhibitory protein 1.	0.940
ENSPFOP00000000909	ENSPFOP00000023566	ENSPFOP00000000909	ENSPFOP00000023566	Zinc finger, ZZ-type containing 3.	YEATS domain containing 2.	0.922
ENSPFOP00000000909	dr1	ENSPFOP00000000909	ENSPFOP00000016453	Zinc finger, ZZ-type containing 3.	Down-regulator of transcription 1.	0.876
ENSPFOP00000000909	ino80e	ENSPFOP00000000909	ENSPFOP00000015721	Zinc finger, ZZ-type containing 3.	INO80 complex subunit E.	0.402
ENSPFOP00000000909	kat14	ENSPFOP00000000909	ENSPFOP00000018419	Zinc finger, ZZ-type containing 3.	Lysine acetyltransferase 14.	0.980
ENSPFOP00000000909	sgf29	ENSPFOP00000000909	ENSPFOP00000010049	Zinc finger, ZZ-type containing 3.	SAGA complex associated factor 29.	0.996
ENSPFOP00000000909	tada2a	ENSPFOP00000000909	ENSPFOP00000008986	Zinc finger, ZZ-type containing 3.	Transcriptional adapter.	0.970
ENSPFOP00000008191	ENSPFOP00000000909	ENSPFOP00000008191	ENSPFOP00000000909	Receptor for activated C kinase 1.	Zinc finger, ZZ-type containing 3.	0.434
ENSPFOP00000008511	LOC103149606	ENSPFOP00000008511	ENSPFOP00000001032	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.948
ENSPFOP00000008511	wnt2b	ENSPFOP00000008511	ENSPFOP00000003478	Uncharacterized protein.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.948
ENSPFOP00000012889	LAMA2	ENSPFOP00000012889	ENSPFOP00000018329	Laminin, alpha 5.	Laminin subunit alpha 2.	0.560
ENSPFOP00000012889	LOC103129995	ENSPFOP00000012889	ENSPFOP00000009324	Laminin, alpha 5.	Dystroglycan 1.	0.873
ENSPFOP00000012889	LOC103141828	ENSPFOP00000012889	ENSPFOP00000026543	Laminin, alpha 5.	Peptidase S72 domain-containing protein.	0.873
ENSPFOP00000013503	ENSPFOP00000015495	ENSPFOP00000013503	ENSPFOP00000015495	INO80 complex ATPase subunit.	INO80 complex subunit Da.	0.975
ENSPFOP00000013503	ino80e	ENSPFOP00000013503	ENSPFOP00000015721	INO80 complex ATPase subunit.	INO80 complex subunit E.	0.993
ENSPFOP00000013503	mcrs1	ENSPFOP00000013503	ENSPFOP00000008951	INO80 complex ATPase subunit.	Microspherule protein 1.	0.980
ENSPFOP00000013503	nfrkb	ENSPFOP00000013503	ENSPFOP00000022640	INO80 complex ATPase subunit.	Nuclear factor related to kappaB binding protein.	0.992
ENSPFOP00000013503	tfpt	ENSPFOP00000013503	ENSPFOP00000008616	INO80 complex ATPase subunit.	TCF3 (E2A) fusion partner.	0.923
ENSPFOP00000013503	trip12	ENSPFOP00000013503	ENSPFOP00000013939	INO80 complex ATPase subunit.	Thyroid hormone receptor interactor 12.	0.424