21 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103142554	Acyl-CoA thioesterase 11b. (576 aa)
	ENSPFOP00000011145	Procollagen C-endopeptidase enhancer b. (552 aa)
	acot7	Acyl-CoA thioesterase 7. (343 aa)
	acaa2	Acetyl-CoA acyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
	abcd1	ATP-binding cassette, sub-family D (ALD), member 1. (754 aa)
	ACOT11	Uncharacterized protein. (608 aa)
	acot13	Acyl-CoA thioesterase 13. (142 aa)
	LOC103138011	Uncharacterized protein. (441 aa)
	ENSPFOP00000016867	Acyl-CoA thioesterase 16. (420 aa)
	LOC103152705	Acyl-CoA thioesterase 19. (437 aa)
	LOC103144302	Uncharacterized protein. (467 aa)
	ENSPFOP00000023750	BAAT_C domain-containing protein. (204 aa)
	ENSPFOP00000031170	acyl-CoA thioesterase 8. (177 aa)
	acot9	Acyl-CoA thioesterase 9, tandem duplicate 2. (435 aa)
	abcd3	ATP-binding cassette, sub-family D (ALD), member 3a. (659 aa)
	mblac2	Metallo-beta-lactamase domain containing 2. (276 aa)
	ENSPFOP00000006595	ATP-binding cassette, sub-family D (ALD), member 2. (761 aa)
	olah	Oleoyl-ACP hydrolase. (254 aa)
	ENSPFOP00000004970	Phospholipase A2, group VI (cytosolic, calcium-independent). (825 aa)
	LOC103144076	Acyl-CoA thioesterase 8. (337 aa)
	ppt1	Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile). (303 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACOT11	ENSPFOP00000011145	ENSPFOP00000013572	ENSPFOP00000011145	Uncharacterized protein.	Procollagen C-endopeptidase enhancer b.	0.495
ACOT11	ENSPFOP00000016867	ENSPFOP00000013572	ENSPFOP00000016867	Uncharacterized protein.	Acyl-CoA thioesterase 16.	0.569
ACOT11	ENSPFOP00000023750	ENSPFOP00000013572	ENSPFOP00000023750	Uncharacterized protein.	BAAT_C domain-containing protein.	0.594
ACOT11	LOC103138011	ENSPFOP00000013572	ENSPFOP00000014089	Uncharacterized protein.	Uncharacterized protein.	0.594
ACOT11	LOC103144302	ENSPFOP00000013572	ENSPFOP00000022568	Uncharacterized protein.	Uncharacterized protein.	0.557
ACOT11	LOC103152705	ENSPFOP00000013572	ENSPFOP00000017062	Uncharacterized protein.	Acyl-CoA thioesterase 19.	0.594
ACOT11	acaa2	ENSPFOP00000013572	ENSPFOP00000012581	Uncharacterized protein.	Acetyl-CoA acyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family.	0.543
ACOT11	acot13	ENSPFOP00000013572	ENSPFOP00000013786	Uncharacterized protein.	Acyl-CoA thioesterase 13.	0.622
ACOT11	acot7	ENSPFOP00000013572	ENSPFOP00000011173	Uncharacterized protein.	Acyl-CoA thioesterase 7.	0.588
ENSPFOP00000006595	abcd1	ENSPFOP00000006595	ENSPFOP00000012763	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 1.	0.882
ENSPFOP00000006595	abcd3	ENSPFOP00000006595	ENSPFOP00000009115	ATP-binding cassette, sub-family D (ALD), member 2.	ATP-binding cassette, sub-family D (ALD), member 3a.	0.947
ENSPFOP00000011145	ACOT11	ENSPFOP00000011145	ENSPFOP00000013572	Procollagen C-endopeptidase enhancer b.	Uncharacterized protein.	0.495
ENSPFOP00000011145	ENSPFOP00000023750	ENSPFOP00000011145	ENSPFOP00000023750	Procollagen C-endopeptidase enhancer b.	BAAT_C domain-containing protein.	0.501
ENSPFOP00000011145	LOC103138011	ENSPFOP00000011145	ENSPFOP00000014089	Procollagen C-endopeptidase enhancer b.	Uncharacterized protein.	0.501
ENSPFOP00000011145	LOC103142554	ENSPFOP00000011145	ENSPFOP00000018105	Procollagen C-endopeptidase enhancer b.	Acyl-CoA thioesterase 11b.	0.495
ENSPFOP00000011145	acot7	ENSPFOP00000011145	ENSPFOP00000011173	Procollagen C-endopeptidase enhancer b.	Acyl-CoA thioesterase 7.	0.495
ENSPFOP00000011145	acot9	ENSPFOP00000011145	ENSPFOP00000009986	Procollagen C-endopeptidase enhancer b.	Acyl-CoA thioesterase 9, tandem duplicate 2.	0.495
ENSPFOP00000016867	ACOT11	ENSPFOP00000016867	ENSPFOP00000013572	Acyl-CoA thioesterase 16.	Uncharacterized protein.	0.569
ENSPFOP00000016867	ENSPFOP00000023750	ENSPFOP00000016867	ENSPFOP00000023750	Acyl-CoA thioesterase 16.	BAAT_C domain-containing protein.	0.691
ENSPFOP00000016867	ENSPFOP00000031170	ENSPFOP00000016867	ENSPFOP00000031170	Acyl-CoA thioesterase 16.	acyl-CoA thioesterase 8.	0.676