STRINGSTRING
LOC103153435 LOC103153435 ENSPFOP00000014188 ENSPFOP00000014188 SHMT2 SHMT2 ENSPFOP00000014933 ENSPFOP00000014933 dhx36 dhx36 utp23 utp23 ENSPFOP00000004344 ENSPFOP00000004344 ENSPFOP00000005060 ENSPFOP00000005060 shmt2 shmt2 cct5 cct5 mrps11 mrps11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103153435Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (483 aa)
ENSPFOP00000014188La ribonucleoprotein domain family, member 6a. (515 aa)
SHMT2Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (532 aa)
ENSPFOP00000014933Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (485 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1062 aa)
utp23UTP23 small subunit processome component. (254 aa)
ENSPFOP00000004344Fragile X mental retardation 1. (607 aa)
ENSPFOP00000005060Ribosomal L1 domain containing 1. (361 aa)
shmt2Serine hydroxymethyltransferase 2 (mitochondrial). (501 aa)
cct5Chaperonin containing TCP1, subunit 5 (epsilon). (541 aa)
mrps11Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (194 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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