STRINGSTRING
LOC103142531 LOC103142531 ENSPFOP00000001016 ENSPFOP00000001016 vti1a vti1a yipf4 yipf4 ENSPFOP00000004510 ENSPFOP00000004510 yipf5 yipf5 LOC103138749 LOC103138749 stx5 stx5 bet1 bet1 LOC103149496 LOC103149496 vti1b vti1b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103142531SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (219 aa)
ENSPFOP00000001016USO1 vesicle transport factor. (889 aa)
vti1aVesicle transport through interaction with t-SNAREs 1A. (224 aa)
yipf4Protein YIPF. (237 aa)
ENSPFOP00000004510USO1 vesicle transport factor. (934 aa)
yipf5Protein YIPF. (257 aa)
LOC103138749Zgc:123321. (235 aa)
stx5Syntaxin 5A; Belongs to the syntaxin family. (326 aa)
bet1Bet1 golgi vesicular membrane trafficking protein. (112 aa)
LOC103149496SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (215 aa)
vti1bVesicle transport through interaction with t-SNAREs 1B. (227 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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