STRINGSTRING
ENSPFOP00000003608 ENSPFOP00000003608 LOC103138818 LOC103138818 ENSPFOP00000003199 ENSPFOP00000003199 xpot xpot mrpl18 mrpl18 ENSPFOP00000001874 ENSPFOP00000001874 hnrnpa1 hnrnpa1 LOC103145252 LOC103145252 LOC103150752 LOC103150752 ENSPFOP00000001377 ENSPFOP00000001377 LOC103150096 LOC103150096 ENSPFOP00000000701 ENSPFOP00000000701 SRSF3 SRSF3 LOC103132132 LOC103132132 thoc7 thoc7 DDX39A DDX39A nup35 nup35 nup58 nup58 ssb ssb IWS1 IWS1 ran ran ENSPFOP00000009492 ENSPFOP00000009492 ENSPFOP00000009319 ENSPFOP00000009319 kpnb1 kpnb1 polr2d polr2d srsf7 srsf7 LOC103150989-2 LOC103150989-2 eif5a2 eif5a2 LOC103136959 LOC103136959 thoc6 thoc6 thoc3 thoc3 ranbp2 ranbp2 nutf2 nutf2 igf2bp2 igf2bp2 nxt2 nxt2 LOC103150989 LOC103150989 sidt2 sidt2 ENSPFOP00000007215 ENSPFOP00000007215 nup160 nup160 tpr tpr ENSPFOP00000006365 ENSPFOP00000006365 LOC103145299 LOC103145299 nup188 nup188 TGFBR2 TGFBR2 rae1 rae1 xpo5 xpo5 nup98 nup98 LOC103131447 LOC103131447 chtop chtop rftn2 rftn2 ENSPFOP00000004888 ENSPFOP00000004888 LOC107836566 LOC107836566 dhx9 dhx9 ENSPFOP00000028952 ENSPFOP00000028952 LOC103143640 LOC103143640 thoc1 thoc1 ENSPFOP00000027348 ENSPFOP00000027348 seh1l seh1l LOC103155406 LOC103155406 ENSPFOP00000024185 ENSPFOP00000024185 EIF5AL1 EIF5AL1 nup43 nup43 ENSPFOP00000020641 ENSPFOP00000020641 nup155 nup155 LOC103154378 LOC103154378 ENSPFOP00000019679 ENSPFOP00000019679 tomm20 tomm20 eny2 eny2 LOC103133919 LOC103133919 LOC103137300 LOC103137300 LOC103137614 LOC103137614 ENSPFOP00000018099 ENSPFOP00000018099 LOC103138330 LOC103138330 nup107 nup107 ENSPFOP00000017250 ENSPFOP00000017250 ENSPFOP00000017245 ENSPFOP00000017245 LOC103133395 LOC103133395 thoc5 thoc5 sec13 sec13 magoh magoh nup50 nup50 LOC103153884 LOC103153884 ENSPFOP00000014516 ENSPFOP00000014516 snupn snupn LOC103137288 LOC103137288 LOC103151187 LOC103151187 hnrnpa3 hnrnpa3 gle1 gle1 sarnp sarnp ythdc1 ythdc1 LOC103154927 LOC103154927 upf3a upf3a ENSPFOP00000013288 ENSPFOP00000013288 nup93 nup93 ENSPFOP00000013080 ENSPFOP00000013080 NUP62 NUP62 nup133 nup133 nup85 nup85 nup88 nup88 ENSPFOP00000011455 ENSPFOP00000011455 LOC103146529 LOC103146529 ndc1 ndc1 NUP214 NUP214 rbm8a rbm8a LOC103144233 LOC103144233 NCBP1 NCBP1 ENSPFOP00000004344 ENSPFOP00000004344 LOC103155680 LOC103155680 nol6 nol6 nup54 nup54 alkbh5 alkbh5 PNPT1 PNPT1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPFOP00000003608TSC complex subunit 1b. (1249 aa)
LOC103138818Si:ch211-216l23.2. (429 aa)
ENSPFOP00000003199Raftlin, lipid raft linker 1a. (435 aa)
xpotExportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. (971 aa)
mrpl18Mitochondrial ribosomal protein L18. (189 aa)
ENSPFOP00000001874Phosphorylated adaptor for RNA export. (393 aa)
hnrnpa1Uncharacterized protein. (338 aa)
LOC103145252Nucleoporin 42. (419 aa)
LOC103150752Exportin 1 (CRM1 homolog, yeast) a. (1066 aa)
ENSPFOP00000001377POM121 transmembrane nucleoporin. (1138 aa)
LOC103150096Uncharacterized protein. (427 aa)
ENSPFOP00000000701Nuclear cap binding subunit 3. (619 aa)
SRSF3Serine and arginine rich splicing factor 3. (125 aa)
LOC103132132Stem-loop binding protein. (270 aa)
thoc7THO complex 7. (203 aa)
DDX39ADExD-box helicase 39A. (427 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (296 aa)
nup58Nucleoporin 58. (594 aa)
ssbSmall RNA binding exonuclease protection factor La. (400 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (740 aa)
ranGTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (229 aa)
ENSPFOP00000009492Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (416 aa)
ENSPFOP00000009319Zgc:153681. (625 aa)
kpnb1Karyopherin (importin) beta 1. (876 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
srsf7Serine and arginine rich splicing factor 7b. (229 aa)
LOC103150989-2ATP-dependent RNA helicase DDX19B-like. (487 aa)
eif5a2Eukaryotic translation initiation factor 5A. (156 aa)
LOC103136959TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...] (593 aa)
thoc6THO complex 6. (323 aa)
thoc3THO complex 3. (349 aa)
ranbp2RAN binding protein 2. (3082 aa)
nutf2Nuclear transport factor 2. (127 aa)
igf2bp2Insulin-like growth factor 2 mRNA binding protein 2a. (614 aa)
nxt2Nuclear transport factor 2-like export factor 2. (143 aa)
LOC103150989Zgc:193690. (487 aa)
sidt2SID1 transmembrane family, member 2. (875 aa)
ENSPFOP00000007215Uncharacterized protein. (680 aa)
nup160Nucleoporin 160. (1396 aa)
tprTranslocated promoter region a, nuclear basket protein. (2481 aa)
ENSPFOP00000006365PCI domain containing 2. (400 aa)
LOC103145299Insulin-like growth factor 2 mRNA binding protein 3. (609 aa)
nup188Nucleoporin 188. (1749 aa)
TGFBR2Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (536 aa)
rae1Ribonucleic acid export 1. (368 aa)
xpo5Exportin 5. (1221 aa)
nup98Nucleoporin 98. (1820 aa)
LOC103131447Uncharacterized protein. (757 aa)
chtopChromatin target of PRMT1a. (245 aa)
rftn2Raftlin family member 2. (438 aa)
ENSPFOP00000004888SEM1 26S proteasome complex subunit. (71 aa)
LOC107836566Uncharacterized protein. (192 aa)
dhx9DRBM domain-containing protein. (90 aa)
ENSPFOP00000028952Aly/REF export factor. (274 aa)
LOC103143640Polymerase (DNA-directed), delta interacting protein 3. (488 aa)
thoc1THO complex 1. (654 aa)
ENSPFOP00000027348Casc3 exon junction complex subunit. (577 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
LOC103155406Stem-loop binding protein 2. (338 aa)
ENSPFOP00000024185Uncharacterized protein. (233 aa)
EIF5AL1Eukaryotic translation initiation factor 5A. (155 aa)
nup43Nucleoporin 43. (370 aa)
ENSPFOP00000020641Uncharacterized protein. (299 aa)
nup155Nucleoporin 155. (1367 aa)
LOC103154378Insulin-like growth factor 2 mRNA binding protein 1. (601 aa)
ENSPFOP00000019679THO complex 2. (1548 aa)
tomm20Translocase of outer mitochondrial membrane 20b. (146 aa)
eny2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (95 aa)
LOC103133919Nucleophosmin 1a. (299 aa)
LOC103137300Nucleophosmin 1b. (297 aa)
LOC103137614RRM domain-containing protein. (168 aa)
ENSPFOP00000018099Nucleoporin 37. (327 aa)
LOC103138330Serine and arginine rich splicing factor 7a. (257 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (902 aa)
ENSPFOP00000017250annotation not available (167 aa)
ENSPFOP00000017245Uncharacterized protein. (168 aa)
LOC103133395RRM domain-containing protein. (243 aa)
thoc5THO complex 5. (685 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
magohMago homolog, exon junction complex subunit. (147 aa)
nup50Nucleoporin 50. (449 aa)
LOC103153884DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast). (488 aa)
ENSPFOP00000014516Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (167 aa)
snupnSnurportin 1. (376 aa)
LOC103137288Translocated promoter region b, nuclear basket protein. (2358 aa)
LOC103151187QKI, KH domain containing, RNA binding 2. (349 aa)
hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (332 aa)
gle1GLE1 RNA export mediator. (747 aa)
sarnpSAP domain containing ribonucleoprotein. (212 aa)
ythdc1YTH domain containing 1. (663 aa)
LOC103154927Exportin 1 (CRM1 homolog, yeast) b. (1071 aa)
upf3aUPF3A regulator of nonsense mediated mRNA decay. (463 aa)
ENSPFOP00000013288Nucleoporin 153. (1456 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
ENSPFOP00000013080Minichromosome maintenance complex component 3 associated protein. (1950 aa)
NUP62Nucleoporin 62. (553 aa)
nup133Nucleoporin 133. (1116 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
nup88Nucleoporin 88. (713 aa)
ENSPFOP00000011455Y box binding protein 1. (321 aa)
LOC103146529Eukaryotic translation initiation factor 5A. (156 aa)
ndc1NDC1 transmembrane nucleoporin. (669 aa)
NUP214Nucleoporin 214. (1694 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (175 aa)
LOC103144233QKI, KH domain containing, RNA binding a. (342 aa)
NCBP1Nuclear cap binding protein subunit 1. (799 aa)
ENSPFOP00000004344Fragile X mental retardation 1. (607 aa)
LOC103155680Lymphoid-restricted membrane protein. (1529 aa)
nol6Nucleolar protein 6. (1145 aa)
nup54Uncharacterized protein. (566 aa)
alkbh5AlkB homolog 5, RNA demethylase. (361 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (770 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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