67 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103138264	Transforming growth factor beta; Belongs to the TGF-beta family. (380 aa)
	ENSPFOP00000000016	Nuclear receptor binding SET domain protein 1b. (1762 aa)
	LOC103131595	Uncharacterized protein. (215 aa)
	ENSPFOP00000000257	UPAR/Ly6 domain-containing protein. (202 aa)
	TFAP4	BHLH domain-containing protein. (332 aa)
	ENSPFOP00000001001	Ankyrin repeat domain 33Ab. (397 aa)
	ENSPFOP00000001322	Histone-lysine N-methyltransferase, H3 lysine-79 specific. (1446 aa)
	LOC103156947	Uncharacterized protein. (484 aa)
	sirt2	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (383 aa)
	sri	Uncharacterized protein. (187 aa)
	smo	Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (811 aa)
	ENSPFOP00000004131	JunE proto-oncogene, AP-1 transcription factor subunit. (303 aa)
	ENSPFOP00000004237	Excision repair cross-complementation group 4. (761 aa)
	rb1	Retinoblastoma 1. (913 aa)
	ENSPFOP00000005486	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (440 aa)
	msx1	Muscle segment homeobox 1a. (281 aa)
	ddit3	DNA-damage-inducible transcript 3. (313 aa)
	LOC103134039	Muscle segment homeobox 3. (247 aa)
	plaur	Uncharacterized protein. (207 aa)
	LOC103145972	Thioredoxin; Belongs to the thioredoxin family. (108 aa)
	habp4	Hyaluronan binding protein 4. (365 aa)
	ENSPFOP00000007938	Uncharacterized protein. (1527 aa)
	LOC103141134	Ankyrin repeat domain 33Aa. (450 aa)
	LOC103147178	Grancalcin. (242 aa)
	LOC103131284	Uncharacterized protein. (1798 aa)
	LOC103135272	Ankyrin repeat domain 33ba. (534 aa)
	pinx1	PIN2 (TERF1) interacting telomerase inhibitor 1. (363 aa)
	ZNF462	Zinc finger protein 462. (1993 aa)
	edf1	Endothelial differentiation-related factor 1. (148 aa)
	ENSPFOP00000011033	Lymphoid enhancer-binding factor 1. (370 aa)
	tfap4	Transcription factor AP-4 (activating enhancer binding protein 4). (329 aa)
	taf10	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
	wfikkn2	Info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a. (580 aa)
	rsf1	PHD-type domain-containing protein. (1373 aa)
	LOC103135607	Nuclear receptor binding SET domain protein 1a. (2169 aa)
	HAND1	Heart and neural crest derivatives expressed 1. (194 aa)
	zmpste24	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (471 aa)
	znf593	Zinc finger protein 593. (129 aa)
	ENSPFOP00000013871	E2F transcription factor 1. (428 aa)
	LOC103151548	Ankyrin repeat domain 33Bb. (529 aa)
	ENSPFOP00000014564	E1A binding protein p300 b. (2474 aa)
	cdt1	Chromatin licensing and DNA replication factor 1. (651 aa)
	ski	V-ski avian sarcoma viral oncogene homolog a. (718 aa)
	ENSPFOP00000015509	GATA binding protein 1a. (427 aa)
	hmga2	Uncharacterized protein. (115 aa)
	LOC103144329	MyoD family inhibitor. (288 aa)
	ENSPFOP00000017193	Excision repair cross-complementation group 2. (760 aa)
	gtf2b	General transcription factor IIB. (318 aa)
	igf1	Insulin-like growth factor 1. (186 aa)
	ENSPFOP00000018828	WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b. (395 aa)
	WFIKKN2	Uncharacterized protein. (557 aa)
	LOC103144270	WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b. (577 aa)
	ENSPFOP00000019177	Epidermal growth factor. (1030 aa)
	nek2	NIMA-related kinase 2. (440 aa)
	LOC103138434	Ring finger protein 220a. (616 aa)
	ENSPFOP00000020767	Inhibitor of DNA binding 1, HLH protein. (116 aa)
	LOC103137045	Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (324 aa)
	ENSPFOP00000022446	Uncharacterized protein. (188 aa)
	ENSPFOP00000024865	PHD-type domain-containing protein. (977 aa)
	ENSPFOP00000025749	Uncharacterized protein. (199 aa)
	ENSPFOP00000025882	Ring finger protein 220b. (250 aa)
	ENSPFOP00000027448	SAP domain-containing protein. (962 aa)
	ENSPFOP00000028624	Uncharacterized protein. (984 aa)
	LOC103145971	Thioredoxin; Belongs to the thioredoxin family. (107 aa)
	ctnnbip1	Catenin, beta interacting protein 1. (81 aa)
	LOC107834831	Excision repair cross-complementation group 4. (587 aa)
	ENSPFOP00000030727	ANK_REP_REGION domain-containing protein. (422 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000000016	ENSPFOP00000001322	ENSPFOP00000000016	ENSPFOP00000001322	Nuclear receptor binding SET domain protein 1b.	Histone-lysine N-methyltransferase, H3 lysine-79 specific.	0.774
ENSPFOP00000000016	ENSPFOP00000014564	ENSPFOP00000000016	ENSPFOP00000014564	Nuclear receptor binding SET domain protein 1b.	E1A binding protein p300 b.	0.522
ENSPFOP00000000016	ENSPFOP00000028624	ENSPFOP00000000016	ENSPFOP00000028624	Nuclear receptor binding SET domain protein 1b.	Uncharacterized protein.	0.522
ENSPFOP00000000016	sirt2	ENSPFOP00000000016	ENSPFOP00000003166	Nuclear receptor binding SET domain protein 1b.	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.	0.410
ENSPFOP00000001322	ENSPFOP00000000016	ENSPFOP00000001322	ENSPFOP00000000016	Histone-lysine N-methyltransferase, H3 lysine-79 specific.	Nuclear receptor binding SET domain protein 1b.	0.774
ENSPFOP00000001322	LOC103135607	ENSPFOP00000001322	ENSPFOP00000012106	Histone-lysine N-methyltransferase, H3 lysine-79 specific.	Nuclear receptor binding SET domain protein 1a.	0.774
ENSPFOP00000001322	sirt2	ENSPFOP00000001322	ENSPFOP00000003166	Histone-lysine N-methyltransferase, H3 lysine-79 specific.	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.	0.499
ENSPFOP00000004131	ENSPFOP00000014564	ENSPFOP00000004131	ENSPFOP00000014564	JunE proto-oncogene, AP-1 transcription factor subunit.	E1A binding protein p300 b.	0.868
ENSPFOP00000004131	ENSPFOP00000015509	ENSPFOP00000004131	ENSPFOP00000015509	JunE proto-oncogene, AP-1 transcription factor subunit.	GATA binding protein 1a.	0.458
ENSPFOP00000004131	ENSPFOP00000019177	ENSPFOP00000004131	ENSPFOP00000019177	JunE proto-oncogene, AP-1 transcription factor subunit.	Epidermal growth factor.	0.428
ENSPFOP00000004131	ENSPFOP00000028624	ENSPFOP00000004131	ENSPFOP00000028624	JunE proto-oncogene, AP-1 transcription factor subunit.	Uncharacterized protein.	0.868
ENSPFOP00000004131	ddit3	ENSPFOP00000004131	ENSPFOP00000006905	JunE proto-oncogene, AP-1 transcription factor subunit.	DNA-damage-inducible transcript 3.	0.468
ENSPFOP00000004131	edf1	ENSPFOP00000004131	ENSPFOP00000010390	JunE proto-oncogene, AP-1 transcription factor subunit.	Endothelial differentiation-related factor 1.	0.501
ENSPFOP00000004237	ENSPFOP00000017193	ENSPFOP00000004237	ENSPFOP00000017193	Excision repair cross-complementation group 4.	Excision repair cross-complementation group 2.	0.840
ENSPFOP00000011033	ENSPFOP00000013871	ENSPFOP00000011033	ENSPFOP00000013871	Lymphoid enhancer-binding factor 1.	E2F transcription factor 1.	0.415
ENSPFOP00000011033	ENSPFOP00000014564	ENSPFOP00000011033	ENSPFOP00000014564	Lymphoid enhancer-binding factor 1.	E1A binding protein p300 b.	0.944
ENSPFOP00000011033	ENSPFOP00000028624	ENSPFOP00000011033	ENSPFOP00000028624	Lymphoid enhancer-binding factor 1.	Uncharacterized protein.	0.815
ENSPFOP00000011033	msx1	ENSPFOP00000011033	ENSPFOP00000006516	Lymphoid enhancer-binding factor 1.	Muscle segment homeobox 1a.	0.527
ENSPFOP00000013871	ENSPFOP00000011033	ENSPFOP00000013871	ENSPFOP00000011033	E2F transcription factor 1.	Lymphoid enhancer-binding factor 1.	0.415
ENSPFOP00000013871	ENSPFOP00000014564	ENSPFOP00000013871	ENSPFOP00000014564	E2F transcription factor 1.	E1A binding protein p300 b.	0.756