13 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pot1	Telo_bind domain-containing protein. (832 aa)
	GREM1	Gremlin. (182 aa)
	nek2	NIMA-related kinase 2. (440 aa)
	dkc1	Dyskeratosis congenita 1, dyskerin. (500 aa)
	LOC103156947	Uncharacterized protein. (484 aa)
	nvl	Nuclear VCP like. (815 aa)
	map3k4	Mitogen-activated protein kinase kinase kinase 4. (1573 aa)
	cct2	Chaperonin containing TCP1, subunit 2 (beta). (535 aa)
	naf1	Uncharacterized protein. (479 aa)
	wrap53	WD repeat containing, antisense to TP53. (553 aa)
	pnkp	Polynucleotide kinase 3'-phosphatase. (593 aa)
	map2k7	Mitogen-activated protein kinase kinase 7. (439 aa)
	mapkapk5	MAPK activated protein kinase 5. (471 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103156947	dkc1	ENSPFOP00000002381	ENSPFOP00000018771	Uncharacterized protein.	Dyskeratosis congenita 1, dyskerin.	0.673
LOC103156947	pot1	ENSPFOP00000002381	ENSPFOP00000017027	Uncharacterized protein.	Telo_bind domain-containing protein.	0.995
LOC103156947	wrap53	ENSPFOP00000002381	ENSPFOP00000008839	Uncharacterized protein.	WD repeat containing, antisense to TP53.	0.653
cct2	wrap53	ENSPFOP00000011867	ENSPFOP00000008839	Chaperonin containing TCP1, subunit 2 (beta).	WD repeat containing, antisense to TP53.	0.454
dkc1	LOC103156947	ENSPFOP00000018771	ENSPFOP00000002381	Dyskeratosis congenita 1, dyskerin.	Uncharacterized protein.	0.673
dkc1	naf1	ENSPFOP00000018771	ENSPFOP00000010683	Dyskeratosis congenita 1, dyskerin.	Uncharacterized protein.	0.995
dkc1	pot1	ENSPFOP00000018771	ENSPFOP00000017027	Dyskeratosis congenita 1, dyskerin.	Telo_bind domain-containing protein.	0.729
dkc1	wrap53	ENSPFOP00000018771	ENSPFOP00000008839	Dyskeratosis congenita 1, dyskerin.	WD repeat containing, antisense to TP53.	0.991
naf1	dkc1	ENSPFOP00000010683	ENSPFOP00000018771	Uncharacterized protein.	Dyskeratosis congenita 1, dyskerin.	0.995
pot1	LOC103156947	ENSPFOP00000017027	ENSPFOP00000002381	Telo_bind domain-containing protein.	Uncharacterized protein.	0.995
pot1	dkc1	ENSPFOP00000017027	ENSPFOP00000018771	Telo_bind domain-containing protein.	Dyskeratosis congenita 1, dyskerin.	0.729
pot1	wrap53	ENSPFOP00000017027	ENSPFOP00000008839	Telo_bind domain-containing protein.	WD repeat containing, antisense to TP53.	0.707
wrap53	LOC103156947	ENSPFOP00000008839	ENSPFOP00000002381	WD repeat containing, antisense to TP53.	Uncharacterized protein.	0.653
wrap53	cct2	ENSPFOP00000008839	ENSPFOP00000011867	WD repeat containing, antisense to TP53.	Chaperonin containing TCP1, subunit 2 (beta).	0.454
wrap53	dkc1	ENSPFOP00000008839	ENSPFOP00000018771	WD repeat containing, antisense to TP53.	Dyskeratosis congenita 1, dyskerin.	0.991
wrap53	pot1	ENSPFOP00000008839	ENSPFOP00000017027	WD repeat containing, antisense to TP53.	Telo_bind domain-containing protein.	0.707