31 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103134641	YOD1 deubiquitinase. (300 aa)
	STAMBPL1	STAM binding protein like 1. (300 aa)
	ENSPFOP00000028108	Uncharacterized protein. (799 aa)
	ENSPFOP00000028055	Reverse transcriptase domain-containing protein. (432 aa)
	LOC103134639	Ubiquitin thioesterase OTU1. (300 aa)
	ENSPFOP00000021913	USP8_dimer domain-containing protein. (144 aa)
	ENSPFOP00000021397	Reverse transcriptase domain-containing protein. (784 aa)
	ENSPFOP00000021337	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family. (769 aa)
	LOC107836631	OTU deubiquitinase 1. (406 aa)
	ENSPFOP00000020763	BRCA1/BRCA2-containing complex, subunit 3. (266 aa)
	ENSPFOP00000017948	Abraxas 2, BRISC complex subunit. (450 aa)
	LOC103133569	Zinc finger, RAN-binding domain containing 1b. (775 aa)
	usp8	Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family. (1075 aa)
	otud5	OTU deubiquitinase 5a. (551 aa)
	psmd14	Proteasome 26S subunit, non-ATPase 14. (310 aa)
	ENSPFOP00000015906	Ubiquitin carboxyl-terminal hydrolase. (725 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (947 aa)
	ENSPFOP00000015749	Cylindromatosis (turban tumor syndrome), b. (517 aa)
	ENSPFOP00000015262	OTU deubiquitinase 1. (388 aa)
	usp13	Ubiquitin carboxyl-terminal hydrolase. (863 aa)
	tnfaip3	Tumor necrosis factor, alpha-induced protein 3. (824 aa)
	babam1	BRISC and BRCA1 A complex member 1. (382 aa)
	ENSPFOP00000010953	Uncharacterized protein. (711 aa)
	otud7b	OTU deubiquitinase 7B. (912 aa)
	usp7	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1110 aa)
	spata2	Spermatogenesis associated 2. (566 aa)
	LOC103134877	STAM binding protein b. (434 aa)
	otud7a	OTU deubiquitinase 7A. (956 aa)
	LOC103144628	Uncharacterized protein. (964 aa)
	usp16	Ubiquitin carboxyl-terminal hydrolase 16; Specifically deubiquitinates 'Lys-120' of histone H2A (H2AK119Ub), a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Deubiquitination of histone H2A is a prerequisite for subsequent phosphorylation at 'Ser-11' of histone H3 (H3S10ph), and is required for chromosome segregation when cells enter into mitosis. Regulates Hox gene expression via histone H2A deubiquitination. Prefers nucleosomal substrates. Does not deubiquitinate histone H2B. (835 aa)
	ENSPFOP00000000666	Ubiquitin carboxyl-terminal hydrolase. (933 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000000666	ENSPFOP00000021913	ENSPFOP00000000666	ENSPFOP00000021913	Ubiquitin carboxyl-terminal hydrolase.	USP8_dimer domain-containing protein.	0.436
ENSPFOP00000000666	LOC103134877	ENSPFOP00000000666	ENSPFOP00000006600	Ubiquitin carboxyl-terminal hydrolase.	STAM binding protein b.	0.436
ENSPFOP00000000666	STAMBPL1	ENSPFOP00000000666	ENSPFOP00000031148	Ubiquitin carboxyl-terminal hydrolase.	STAM binding protein like 1.	0.436
ENSPFOP00000000666	usp7	ENSPFOP00000000666	ENSPFOP00000008666	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.	0.413
ENSPFOP00000010953	otud7a	ENSPFOP00000010953	ENSPFOP00000004398	Uncharacterized protein.	OTU deubiquitinase 7A.	0.537
ENSPFOP00000010953	otud7b	ENSPFOP00000010953	ENSPFOP00000010883	Uncharacterized protein.	OTU deubiquitinase 7B.	0.537
ENSPFOP00000010953	tnfaip3	ENSPFOP00000010953	ENSPFOP00000012510	Uncharacterized protein.	Tumor necrosis factor, alpha-induced protein 3.	0.575
ENSPFOP00000015749	ENSPFOP00000021337	ENSPFOP00000015749	ENSPFOP00000021337	Cylindromatosis (turban tumor syndrome), b.	Cylindromatosis (turban tumor syndrome), like; Belongs to the peptidase C19 family.	0.884
ENSPFOP00000015749	LOC103144628	ENSPFOP00000015749	ENSPFOP00000002661	Cylindromatosis (turban tumor syndrome), b.	Uncharacterized protein.	0.885
ENSPFOP00000015749	cyld	ENSPFOP00000015749	ENSPFOP00000015841	Cylindromatosis (turban tumor syndrome), b.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.902
ENSPFOP00000015749	spata2	ENSPFOP00000015749	ENSPFOP00000007285	Cylindromatosis (turban tumor syndrome), b.	Spermatogenesis associated 2.	0.929
ENSPFOP00000015906	ENSPFOP00000021913	ENSPFOP00000015906	ENSPFOP00000021913	Ubiquitin carboxyl-terminal hydrolase.	USP8_dimer domain-containing protein.	0.436
ENSPFOP00000015906	LOC103134877	ENSPFOP00000015906	ENSPFOP00000006600	Ubiquitin carboxyl-terminal hydrolase.	STAM binding protein b.	0.436
ENSPFOP00000015906	STAMBPL1	ENSPFOP00000015906	ENSPFOP00000031148	Ubiquitin carboxyl-terminal hydrolase.	STAM binding protein like 1.	0.436
ENSPFOP00000015906	usp7	ENSPFOP00000015906	ENSPFOP00000008666	Ubiquitin carboxyl-terminal hydrolase.	Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family.	0.413
ENSPFOP00000017948	ENSPFOP00000020763	ENSPFOP00000017948	ENSPFOP00000020763	Abraxas 2, BRISC complex subunit.	BRCA1/BRCA2-containing complex, subunit 3.	0.998
ENSPFOP00000017948	ENSPFOP00000021397	ENSPFOP00000017948	ENSPFOP00000021397	Abraxas 2, BRISC complex subunit.	Reverse transcriptase domain-containing protein.	0.461
ENSPFOP00000017948	ENSPFOP00000028055	ENSPFOP00000017948	ENSPFOP00000028055	Abraxas 2, BRISC complex subunit.	Reverse transcriptase domain-containing protein.	0.461
ENSPFOP00000017948	ENSPFOP00000028108	ENSPFOP00000017948	ENSPFOP00000028108	Abraxas 2, BRISC complex subunit.	Uncharacterized protein.	0.461
ENSPFOP00000017948	babam1	ENSPFOP00000017948	ENSPFOP00000011416	Abraxas 2, BRISC complex subunit.	BRISC and BRCA1 A complex member 1.	0.996