6 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPFOP00000005078	BRCA1 associated RING domain 1. (745 aa)
	brca1	Uncharacterized protein. (1316 aa)
	ankrd39	Ankyrin repeat domain 39. (182 aa)
	ENSPFOP00000017836	Ankyrin repeat and SOCS box containing 6. (438 aa)
	asb6	Uncharacterized protein. (435 aa)
	LOC103137006	RBR-type E3 ubiquitin transferase. (315 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000005078	ENSPFOP00000017836	ENSPFOP00000005078	ENSPFOP00000017836	BRCA1 associated RING domain 1.	Ankyrin repeat and SOCS box containing 6.	0.405
ENSPFOP00000005078	ankrd39	ENSPFOP00000005078	ENSPFOP00000017885	BRCA1 associated RING domain 1.	Ankyrin repeat domain 39.	0.445
ENSPFOP00000005078	asb6	ENSPFOP00000005078	ENSPFOP00000016809	BRCA1 associated RING domain 1.	Uncharacterized protein.	0.405
ENSPFOP00000005078	brca1	ENSPFOP00000005078	ENSPFOP00000004695	BRCA1 associated RING domain 1.	Uncharacterized protein.	0.999
ENSPFOP00000017836	ENSPFOP00000005078	ENSPFOP00000017836	ENSPFOP00000005078	Ankyrin repeat and SOCS box containing 6.	BRCA1 associated RING domain 1.	0.405
ENSPFOP00000017836	brca1	ENSPFOP00000017836	ENSPFOP00000004695	Ankyrin repeat and SOCS box containing 6.	Uncharacterized protein.	0.405
ankrd39	ENSPFOP00000005078	ENSPFOP00000017885	ENSPFOP00000005078	Ankyrin repeat domain 39.	BRCA1 associated RING domain 1.	0.445
ankrd39	brca1	ENSPFOP00000017885	ENSPFOP00000004695	Ankyrin repeat domain 39.	Uncharacterized protein.	0.405
asb6	ENSPFOP00000005078	ENSPFOP00000016809	ENSPFOP00000005078	Uncharacterized protein.	BRCA1 associated RING domain 1.	0.405
asb6	brca1	ENSPFOP00000016809	ENSPFOP00000004695	Uncharacterized protein.	Uncharacterized protein.	0.405
brca1	ENSPFOP00000005078	ENSPFOP00000004695	ENSPFOP00000005078	Uncharacterized protein.	BRCA1 associated RING domain 1.	0.999
brca1	ENSPFOP00000017836	ENSPFOP00000004695	ENSPFOP00000017836	Uncharacterized protein.	Ankyrin repeat and SOCS box containing 6.	0.405
brca1	ankrd39	ENSPFOP00000004695	ENSPFOP00000017885	Uncharacterized protein.	Ankyrin repeat domain 39.	0.405
brca1	asb6	ENSPFOP00000004695	ENSPFOP00000016809	Uncharacterized protein.	Uncharacterized protein.	0.405