(3 nodes) Ornithine/DAP/Arg decarboxylase network (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	azin1	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (453 aa)
	azin1b	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (435 aa)
	odc1	Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (460 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
azin1	odc1	ENSPFOP00000013440	ENSPFOP00000009868	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.646
azin1b	odc1	ENSPFOP00000012408	ENSPFOP00000009868	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.647
odc1	azin1	ENSPFOP00000009868	ENSPFOP00000013440	Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.646
odc1	azin1b	ENSPFOP00000009868	ENSPFOP00000012408	Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.647