(8 nodes) Zinc finger, UBR-type network (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ubr2	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1702 aa)
	LOC103145125	Uncharacterized protein. (895 aa)
	fbxo11	Uncharacterized protein. (880 aa)
	ENSPFOP00000010145	Ubiquitin protein ligase E3 component n-recognin 7. (419 aa)
	ENSPFOP00000010531	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1844 aa)
	ubr4	Ubiquitin protein ligase E3 component n-recognin 4. (5151 aa)
	UBR1	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1749 aa)
	ENSPFOP00000013330	Ubiquitin protein ligase E3 component n-recognin 5. (2555 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000010145	ENSPFOP00000010531	ENSPFOP00000010145	ENSPFOP00000010531	Ubiquitin protein ligase E3 component n-recognin 7.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.459
ENSPFOP00000010145	UBR1	ENSPFOP00000010145	ENSPFOP00000011080	Ubiquitin protein ligase E3 component n-recognin 7.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.403
ENSPFOP00000010145	ubr2	ENSPFOP00000010145	ENSPFOP00000005259	Ubiquitin protein ligase E3 component n-recognin 7.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.403
ENSPFOP00000010145	ubr4	ENSPFOP00000010145	ENSPFOP00000013540	Ubiquitin protein ligase E3 component n-recognin 7.	Ubiquitin protein ligase E3 component n-recognin 4.	0.422
ENSPFOP00000010531	ENSPFOP00000010145	ENSPFOP00000010531	ENSPFOP00000010145	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin protein ligase E3 component n-recognin 7.	0.459
ENSPFOP00000013330	UBR1	ENSPFOP00000013330	ENSPFOP00000011080	Ubiquitin protein ligase E3 component n-recognin 5.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.522
ENSPFOP00000013330	ubr2	ENSPFOP00000013330	ENSPFOP00000005259	Ubiquitin protein ligase E3 component n-recognin 5.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.522
ENSPFOP00000013330	ubr4	ENSPFOP00000013330	ENSPFOP00000013540	Ubiquitin protein ligase E3 component n-recognin 5.	Ubiquitin protein ligase E3 component n-recognin 4.	0.569
UBR1	ENSPFOP00000010145	ENSPFOP00000011080	ENSPFOP00000010145	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin protein ligase E3 component n-recognin 7.	0.403
UBR1	ENSPFOP00000013330	ENSPFOP00000011080	ENSPFOP00000013330	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin protein ligase E3 component n-recognin 5.	0.522
UBR1	ubr4	ENSPFOP00000011080	ENSPFOP00000013540	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin protein ligase E3 component n-recognin 4.	0.483
ubr2	ENSPFOP00000010145	ENSPFOP00000005259	ENSPFOP00000010145	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin protein ligase E3 component n-recognin 7.	0.403
ubr2	ENSPFOP00000013330	ENSPFOP00000005259	ENSPFOP00000013330	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin protein ligase E3 component n-recognin 5.	0.522
ubr2	ubr4	ENSPFOP00000005259	ENSPFOP00000013540	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	Ubiquitin protein ligase E3 component n-recognin 4.	0.483
ubr4	ENSPFOP00000010145	ENSPFOP00000013540	ENSPFOP00000010145	Ubiquitin protein ligase E3 component n-recognin 4.	Ubiquitin protein ligase E3 component n-recognin 7.	0.422
ubr4	ENSPFOP00000013330	ENSPFOP00000013540	ENSPFOP00000013330	Ubiquitin protein ligase E3 component n-recognin 4.	Ubiquitin protein ligase E3 component n-recognin 5.	0.569
ubr4	UBR1	ENSPFOP00000013540	ENSPFOP00000011080	Ubiquitin protein ligase E3 component n-recognin 4.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.483
ubr4	ubr2	ENSPFOP00000013540	ENSPFOP00000005259	Ubiquitin protein ligase E3 component n-recognin 4.	E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.	0.483