(24 nodes) Zinc finger, RanBP2-type superfamily network (Poecilia formosa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPFOP00000016981	RNA binding motif protein 5. (899 aa)
	ENSPFOP00000015383	Zinc finger, RAN-binding domain containing 3. (1092 aa)
	ENSPFOP00000015291	SHANK-associated RH domain interacting protein. (435 aa)
	tab3	TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (573 aa)
	ENSPFOP00000013288	Nucleoporin 153. (1456 aa)
	ENSPFOP00000010953	Uncharacterized protein. (711 aa)
	ewsr1	EWS RNA-binding protein 1b. (602 aa)
	ranbp2	RAN binding protein 2. (3082 aa)
	ENSPFOP00000005591	RNA binding motif protein 10. (768 aa)
	rybp	RING1 and YY1 binding protein b. (268 aa)
	rnf31	Ring finger protein 31. (1111 aa)
	rbck1	RanBP-type and C3HC4-type zinc finger containing 1. (512 aa)
	ENSPFOP00000003978	TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (700 aa)
	LOC103146288	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (471 aa)
	zranb2	Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family. (316 aa)
	nploc4	NPL4 homolog, ubiquitin recognition factor. (630 aa)
	neil3	Nei-like DNA glycosylase 3. (577 aa)
	LOC103135233	Sharpin and rbck1 related. (705 aa)
	YAF2	YY1 associated factor 2. (183 aa)
	LOC103133569	Zinc finger, RAN-binding domain containing 1b. (775 aa)
	mdm2	MDM2 proto-oncogene; Belongs to the MDM2/MDM4 family. (471 aa)
	mdm4	MDM4 regulator of p53; Belongs to the MDM2/MDM4 family. (490 aa)
	capn15	Calpain 15; Belongs to the peptidase C2 family. (1204 aa)
	yaf2	YY1 associated factor 2. (186 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPFOP00000003978	ENSPFOP00000015291	ENSPFOP00000003978	ENSPFOP00000015291	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	SHANK-associated RH domain interacting protein.	0.612
ENSPFOP00000003978	LOC103135233	ENSPFOP00000003978	ENSPFOP00000004061	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	Sharpin and rbck1 related.	0.558
ENSPFOP00000003978	rbck1	ENSPFOP00000003978	ENSPFOP00000002230	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	RanBP-type and C3HC4-type zinc finger containing 1.	0.558
ENSPFOP00000003978	rnf31	ENSPFOP00000003978	ENSPFOP00000001747	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	Ring finger protein 31.	0.557
ENSPFOP00000003978	tab3	ENSPFOP00000003978	ENSPFOP00000014311	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.941
ENSPFOP00000005591	LOC103146288	ENSPFOP00000005591	ENSPFOP00000029374	RNA binding motif protein 10.	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.658
ENSPFOP00000005591	ewsr1	ENSPFOP00000005591	ENSPFOP00000007625	RNA binding motif protein 10.	EWS RNA-binding protein 1b.	0.655
ENSPFOP00000005591	zranb2	ENSPFOP00000005591	ENSPFOP00000027951	RNA binding motif protein 10.	Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family.	0.503
ENSPFOP00000010953	nploc4	ENSPFOP00000010953	ENSPFOP00000027472	Uncharacterized protein.	NPL4 homolog, ubiquitin recognition factor.	0.628
ENSPFOP00000010953	rnf31	ENSPFOP00000010953	ENSPFOP00000001747	Uncharacterized protein.	Ring finger protein 31.	0.429
ENSPFOP00000013288	ranbp2	ENSPFOP00000013288	ENSPFOP00000007571	Nucleoporin 153.	RAN binding protein 2.	0.999
ENSPFOP00000015291	ENSPFOP00000003978	ENSPFOP00000015291	ENSPFOP00000003978	SHANK-associated RH domain interacting protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.612
ENSPFOP00000015291	LOC103135233	ENSPFOP00000015291	ENSPFOP00000004061	SHANK-associated RH domain interacting protein.	Sharpin and rbck1 related.	0.995
ENSPFOP00000015291	nploc4	ENSPFOP00000015291	ENSPFOP00000027472	SHANK-associated RH domain interacting protein.	NPL4 homolog, ubiquitin recognition factor.	0.493
ENSPFOP00000015291	rbck1	ENSPFOP00000015291	ENSPFOP00000002230	SHANK-associated RH domain interacting protein.	RanBP-type and C3HC4-type zinc finger containing 1.	0.996
ENSPFOP00000015291	rnf31	ENSPFOP00000015291	ENSPFOP00000001747	SHANK-associated RH domain interacting protein.	Ring finger protein 31.	0.997
ENSPFOP00000015291	tab3	ENSPFOP00000015291	ENSPFOP00000014311	SHANK-associated RH domain interacting protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.698
ENSPFOP00000016981	LOC103146288	ENSPFOP00000016981	ENSPFOP00000029374	RNA binding motif protein 5.	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.658
ENSPFOP00000016981	ewsr1	ENSPFOP00000016981	ENSPFOP00000007625	RNA binding motif protein 5.	EWS RNA-binding protein 1b.	0.655
ENSPFOP00000016981	zranb2	ENSPFOP00000016981	ENSPFOP00000027951	RNA binding motif protein 5.	Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family.	0.503