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LOC103152281 LOC103152281 mnat1 mnat1 NCBP1 NCBP1 polr2l polr2l POLR2E POLR2E LOC103155672 LOC103155672 ENSPFOP00000006983 ENSPFOP00000006983 nelfa nelfa ENSPFOP00000007709 ENSPFOP00000007709 polr2a polr2a ENSPFOP00000014516 ENSPFOP00000014516 ENSPFOP00000014865 ENSPFOP00000014865 nelfcd nelfcd ercc3 ercc3 gtf2f2 gtf2f2 polr2i polr2i polr2b polr2b ENSPFOP00000017193 ENSPFOP00000017193 cdk7 cdk7 ENSPFOP00000018214 ENSPFOP00000018214 supt4h1 supt4h1 gtf2h1 gtf2h1 polr2h polr2h polr2c polr2c ENSPFOP00000030966 ENSPFOP00000030966 ctdp1 ctdp1 ENSPFOP00000012455 ENSPFOP00000012455 polr2j polr2j ENSPFOP00000011510 ENSPFOP00000011510 polr2d polr2d gtf2h5 gtf2h5 gtf2f1 gtf2f1 polr2f polr2f ENSPFOP00000002792 ENSPFOP00000002792 ENSPFOP00000002819 ENSPFOP00000002819 nelfe nelfe
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103152281Si:dkey-12j5.1. (415 aa)
mnat1MNAT1 component of CDK activating kinase. (308 aa)
NCBP1Nuclear cap binding protein subunit 1. (799 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
LOC103155672General transcription factor IIH, polypeptide 2. (255 aa)
ENSPFOP00000006983Negative elongation factor complex member B. (481 aa)
nelfaNegative elongation factor complex member A. (547 aa)
ENSPFOP00000007709TFIIF_beta domain-containing protein. (140 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1907 aa)
ENSPFOP00000014516Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (167 aa)
ENSPFOP00000014865Uncharacterized protein. (54 aa)
nelfcdNegative elongation factor complex member C/D. (578 aa)
ercc3Excision repair cross-complementation group 3. (780 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (312 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
ENSPFOP00000017193Excision repair cross-complementation group 2. (760 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (360 aa)
ENSPFOP00000018214General transcription factor IIH, polypeptide 3. (303 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
ENSPFOP00000030966Polymerase (RNA) II (DNA directed) polypeptide G-like. (109 aa)
ctdp1CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1. (1004 aa)
ENSPFOP00000012455General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (468 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (118 aa)
ENSPFOP00000011510Transcription elongation factor SPT5. (1004 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSPFOP00000002792Cyclin H; Belongs to the cyclin family. (321 aa)
ENSPFOP00000002819Cyclin H; Belongs to the cyclin family. (334 aa)
nelfeNegative elongation factor complex member E. (357 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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