STRINGSTRING
tpr tpr seh1l seh1l ENSPFOP00000025061 ENSPFOP00000025061 nup43 nup43 ENSPFOP00000021005 ENSPFOP00000021005 nup155 nup155 snrpd3 snrpd3 ENSPFOP00000018099 ENSPFOP00000018099 nup107 nup107 prmt5 prmt5 snrpd2 snrpd2 sec13 sec13 snrpg snrpg nup210 nup210 nup50 nup50 gemin2 gemin2 snupn snupn LOC103137288 LOC103137288 ENSPFOP00000013288 ENSPFOP00000013288 nup93 nup93 clns1a clns1a NUP62 NUP62 nup133 nup133 SNRPD1 SNRPD1 nup85 nup85 LOC103152875 LOC103152875 ENSPFOP00000011845 ENSPFOP00000011845 nup88 nup88 LOC103147250 LOC103147250 gemin4 gemin4 ENSPFOP00000010929 ENSPFOP00000010929 ndc1 ndc1 NUP214 NUP214 ddx20 ddx20 aaas aaas nup35 nup35 nup58 nup58 gemin7 gemin7 LOC103145492 LOC103145492 ranbp2 ranbp2 nup160 nup160 nup188 nup188 rae1 rae1 snrpe snrpe nup54 nup54 gemin8 gemin8 LOC103145252 LOC103145252 WDR77 WDR77 ENSPFOP00000001377 ENSPFOP00000001377 AAAS AAAS nup98 nup98
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tprTranslocated promoter region a, nuclear basket protein. (2481 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
ENSPFOP00000025061Uncharacterized protein. (500 aa)
nup43Nucleoporin 43. (370 aa)
ENSPFOP00000021005Sm domain-containing protein. (46 aa)
nup155Nucleoporin 155. (1367 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
ENSPFOP00000018099Nucleoporin 37. (327 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (902 aa)
prmt5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (643 aa)
snrpd2Small nuclear ribonucleoprotein Sm D2. (118 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
snrpgSmall nuclear ribonucleoprotein G. (76 aa)
nup210Nucleoporin 210. (1880 aa)
nup50Nucleoporin 50. (449 aa)
gemin2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (267 aa)
snupnSnurportin 1. (376 aa)
LOC103137288Translocated promoter region b, nuclear basket protein. (2358 aa)
ENSPFOP00000013288Nucleoporin 153. (1456 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
clns1aChloride channel, nucleotide-sensitive, 1A. (248 aa)
NUP62Nucleoporin 62. (553 aa)
nup133Nucleoporin 133. (1116 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (113 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
LOC103152875Gem nuclear organelle associated protein 5. (1428 aa)
ENSPFOP00000011845Small nuclear ribonucleoprotein-associated protein. (236 aa)
nup88Nucleoporin 88. (713 aa)
LOC103147250Gem (nuclear organelle) associated protein 5. (1427 aa)
gemin4Gem (nuclear organelle) associated protein 4. (1117 aa)
ENSPFOP00000010929Nucleoporin 205. (2030 aa)
ndc1NDC1 transmembrane nucleoporin. (669 aa)
NUP214Nucleoporin 214. (1694 aa)
ddx20DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. (773 aa)
aaasAchalasia, adrenocortical insufficiency, alacrimia. (518 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (296 aa)
nup58Nucleoporin 58. (594 aa)
gemin7Gem (nuclear organelle) associated protein 7. (128 aa)
LOC103145492Survival of motor neuron 1, telomeric. (283 aa)
ranbp2RAN binding protein 2. (3082 aa)
nup160Nucleoporin 160. (1396 aa)
nup188Nucleoporin 188. (1749 aa)
rae1Ribonucleic acid export 1. (368 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (114 aa)
nup54Uncharacterized protein. (566 aa)
gemin8Gem (nuclear organelle) associated protein 8. (195 aa)
LOC103145252Nucleoporin 42. (419 aa)
WDR77WD repeat domain 77. (334 aa)
ENSPFOP00000001377POM121 transmembrane nucleoporin. (1138 aa)
AAASAladin WD repeat nucleoporin. (370 aa)
nup98Nucleoporin 98. (1820 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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