75 items (Poecilia formosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPFOP00000014288	Uncharacterized protein. (473 aa)
	nup98	Nucleoporin 98. (1820 aa)
	AAAS	Aladin WD repeat nucleoporin. (370 aa)
	ENSPFOP00000000872	Uncharacterized protein. (367 aa)
	ENSPFOP00000001102	Uncharacterized protein. (447 aa)
	ENSPFOP00000001377	POM121 transmembrane nucleoporin. (1138 aa)
	pias4	Protein inhibitor of activated STAT, 4a. (509 aa)
	LOC103145252	Nucleoporin 42. (419 aa)
	LOC103139226	Tripartite motif containing 35-28. (472 aa)
	LOC103151982	Uncharacterized protein. (464 aa)
	LOC103143209	Von Hippel-Lindau tumor suppressor. (165 aa)
	LOC103151992	Tripartite motif containing 35-12. (524 aa)
	LOC103152040	Uncharacterized protein. (458 aa)
	ENSPFOP00000004829	Si:dkey-219e21.4. (315 aa)
	ENSPFOP00000004987	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (123 aa)
	rae1	Ribonucleic acid export 1. (368 aa)
	LOC103152009	Tripartite motif containing 35-13. (469 aa)
	ENSPFOP00000005901	Uncharacterized protein. (358 aa)
	nup188	Nucleoporin 188. (1749 aa)
	ENSPFOP00000006055	Uncharacterized protein. (394 aa)
	LOC103153326	Si:ch211-120g10.1. (399 aa)
	tpr	Translocated promoter region a, nuclear basket protein. (2481 aa)
	nup160	Nucleoporin 160. (1396 aa)
	ranbp2	RAN binding protein 2. (3082 aa)
	LOC103137504	Si:dkey-219e21.2. (466 aa)
	nup58	Nucleoporin 58. (594 aa)
	nup35	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (296 aa)
	aaas	Achalasia, adrenocortical insufficiency, alacrimia. (518 aa)
	ENSPFOP00000010557	B30.2/SPRY domain-containing protein. (385 aa)
	ndc1	NDC1 transmembrane nucleoporin. (669 aa)
	ENSPFOP00000010929	Nucleoporin 205. (2030 aa)
	ENSPFOP00000011070	B30.2/SPRY domain-containing protein. (314 aa)
	nup88	Nucleoporin 88. (713 aa)
	nup85	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
	nup133	Nucleoporin 133. (1116 aa)
	NUP62	Nucleoporin 62. (553 aa)
	nup93	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
	ENSPFOP00000014080	Uncharacterized protein. (476 aa)
	LOC103137288	Translocated promoter region b, nuclear basket protein. (2358 aa)
	ENSPFOP00000014870	Uncharacterized protein. (443 aa)
	ube2i	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	nup50	Nucleoporin 50. (449 aa)
	nup210	Nucleoporin 210. (1880 aa)
	sec13	SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
	nup107	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (902 aa)
	mdm2	MDM2 proto-oncogene; Belongs to the MDM2/MDM4 family. (471 aa)
	sumo1	Small ubiquitin like modifier 1. (101 aa)
	ENSPFOP00000018099	Nucleoporin 37. (327 aa)
	ENSPFOP00000018610	Zgc:194990. (410 aa)
	LOC103156595	Uncharacterized protein. (462 aa)
	ENSPFOP00000019129	Uncharacterized protein. (453 aa)
	nup155	Nucleoporin 155. (1367 aa)
	ENSPFOP00000020102	Uncharacterized protein. (452 aa)
	ENSPFOP00000020146	Uncharacterized protein. (480 aa)
	LOC103153870	Uncharacterized protein. (461 aa)
	LOC103143258	Uncharacterized protein. (464 aa)
	LOC103134927	Uncharacterized protein. (458 aa)
	ENSPFOP00000020784	B30.2/SPRY domain-containing protein. (184 aa)
	ENSPFOP00000021071	Uncharacterized protein. (467 aa)
	ENSPFOP00000021109	B30.2/SPRY domain-containing protein. (230 aa)
	ENSPFOP00000021648	Uncharacterized protein. (363 aa)
	nup43	Nucleoporin 43. (370 aa)
	ENSPFOP00000023107	Uncharacterized protein. (451 aa)
	ENSPFOP00000023354	Uncharacterized protein. (464 aa)
	ENSPFOP00000023355	Uncharacterized protein. (466 aa)
	ENSPFOP00000023865	Uncharacterized protein. (427 aa)
	ENSPFOP00000023922	Uncharacterized protein. (422 aa)
	seh1l	SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
	ENSPFOP00000026240	Uncharacterized protein. (462 aa)
	ENSPFOP00000026824	Uncharacterized protein. (437 aa)
	ENSPFOP00000027167	Uncharacterized protein. (289 aa)
	ENSPFOP00000027227	Uncharacterized protein. (483 aa)
	ENSPFOP00000028718	B30.2/SPRY domain-containing protein. (170 aa)
	ENSPFOP00000028953	Uncharacterized protein. (462 aa)
	ENSPFOP00000029910	Uncharacterized protein. (474 aa)

Your Current Organism:

Poecilia formosa

NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAAS	ENSPFOP00000004987	ENSPFOP00000000449	ENSPFOP00000004987	Aladin WD repeat nucleoporin.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.676
AAAS	ENSPFOP00000010929	ENSPFOP00000000449	ENSPFOP00000010929	Aladin WD repeat nucleoporin.	Nucleoporin 205.	0.960
AAAS	ENSPFOP00000018099	ENSPFOP00000000449	ENSPFOP00000018099	Aladin WD repeat nucleoporin.	Nucleoporin 37.	0.893
AAAS	LOC103137288	ENSPFOP00000000449	ENSPFOP00000014127	Aladin WD repeat nucleoporin.	Translocated promoter region b, nuclear basket protein.	0.742
AAAS	LOC103145252	ENSPFOP00000000449	ENSPFOP00000001529	Aladin WD repeat nucleoporin.	Nucleoporin 42.	0.832
AAAS	NUP62	ENSPFOP00000000449	ENSPFOP00000012658	Aladin WD repeat nucleoporin.	Nucleoporin 62.	0.859
AAAS	ndc1	ENSPFOP00000000449	ENSPFOP00000010847	Aladin WD repeat nucleoporin.	NDC1 transmembrane nucleoporin.	0.957
AAAS	nup107	ENSPFOP00000000449	ENSPFOP00000017381	Aladin WD repeat nucleoporin.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.966
AAAS	nup133	ENSPFOP00000000449	ENSPFOP00000012587	Aladin WD repeat nucleoporin.	Nucleoporin 133.	0.906
AAAS	nup155	ENSPFOP00000000449	ENSPFOP00000019937	Aladin WD repeat nucleoporin.	Nucleoporin 155.	0.964
AAAS	nup160	ENSPFOP00000000449	ENSPFOP00000006973	Aladin WD repeat nucleoporin.	Nucleoporin 160.	0.913
AAAS	nup188	ENSPFOP00000000449	ENSPFOP00000006039	Aladin WD repeat nucleoporin.	Nucleoporin 188.	0.948
AAAS	nup210	ENSPFOP00000000449	ENSPFOP00000015876	Aladin WD repeat nucleoporin.	Nucleoporin 210.	0.870
AAAS	nup35	ENSPFOP00000000449	ENSPFOP00000009995	Aladin WD repeat nucleoporin.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.931
AAAS	nup43	ENSPFOP00000000449	ENSPFOP00000022831	Aladin WD repeat nucleoporin.	Nucleoporin 43.	0.902
AAAS	nup50	ENSPFOP00000000449	ENSPFOP00000015656	Aladin WD repeat nucleoporin.	Nucleoporin 50.	0.768
AAAS	nup58	ENSPFOP00000000449	ENSPFOP00000009818	Aladin WD repeat nucleoporin.	Nucleoporin 58.	0.867
AAAS	nup85	ENSPFOP00000000449	ENSPFOP00000012368	Aladin WD repeat nucleoporin.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.932
AAAS	nup88	ENSPFOP00000000449	ENSPFOP00000011723	Aladin WD repeat nucleoporin.	Nucleoporin 88.	0.920
AAAS	nup93	ENSPFOP00000000449	ENSPFOP00000013150	Aladin WD repeat nucleoporin.	Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.	0.950