STRINGSTRING
polr2b polr2b ENSPFOP00000030966 ENSPFOP00000030966 polr2c polr2c ENSPFOP00000028624 ENSPFOP00000028624 polr2h polr2h ENSPFOP00000023165 ENSPFOP00000023165 gtf2h1 gtf2h1 ZNF830 ZNF830 gtf2h5 gtf2h5 ubb ubb ENSPFOP00000018214 ENSPFOP00000018214 cops3 cops3 cdk7 cdk7 ENSPFOP00000017393 ENSPFOP00000017393 ENSPFOP00000017193 ENSPFOP00000017193 LOC103133711 LOC103133711 gps1 gps1 polr2i polr2i ercc3 ercc3 aqr aqr cops7a cops7a ENSPFOP00000014865 ENSPFOP00000014865 ENSPFOP00000014564 ENSPFOP00000014564 rbx1 rbx1 ENSPFOP00000013284 ENSPFOP00000013284 LOC103148202 LOC103148202 rps27a rps27a ENSPFOP00000012455 ENSPFOP00000012455 polr2j polr2j ENSPFOP00000011212 ENSPFOP00000011212 tceanc2 tceanc2 LOC103133241 LOC103133241 uvssa uvssa ENSPFOP00000009506 ENSPFOP00000009506 polr2d polr2d usp7 usp7 polr2a polr2a xpa xpa ercc6 ercc6 LOC103155672 LOC103155672 POLR2E POLR2E tcea1 tcea1 cops2 cops2 polr2l polr2l LOC103131621 LOC103131621 LOC103132215 LOC103132215 mnat1 mnat1 ENSPFOP00000004033 ENSPFOP00000004033 cops5 cops5 TCEANC TCEANC ENSPFOP00000003124 ENSPFOP00000003124 ENSPFOP00000002819 ENSPFOP00000002819 ENSPFOP00000002792 ENSPFOP00000002792 prpf19 prpf19 ENSPFOP00000002509 ENSPFOP00000002509 COPS6-2 COPS6-2 COPS6 COPS6 LOC103151004 LOC103151004 xab2 xab2 uba52 uba52 polr2f polr2f
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
ENSPFOP00000030966Polymerase (RNA) II (DNA directed) polypeptide G-like. (109 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
ENSPFOP00000028624Uncharacterized protein. (984 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSPFOP00000023165Excision repair cross-complementation group 8. (402 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
ZNF830Zinc finger protein 830. (335 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
ubbUbiquitin B. (259 aa)
ENSPFOP00000018214General transcription factor IIH, polypeptide 3. (303 aa)
cops3COP9 signalosome subunit 3. (423 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (360 aa)
ENSPFOP00000017393Cullin 4B; Belongs to the cullin family. (868 aa)
ENSPFOP00000017193Excision repair cross-complementation group 2. (760 aa)
LOC103133711KxDL motif containing 1. (185 aa)
gps1G protein pathway suppressor 1. (486 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
ercc3Excision repair cross-complementation group 3. (780 aa)
aqrAquarius intron-binding spliceosomal factor. (1471 aa)
cops7aCOP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
ENSPFOP00000014865Uncharacterized protein. (54 aa)
ENSPFOP00000014564E1A binding protein p300 b. (2474 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
ENSPFOP00000013284NRDE-2, necessary for RNA interference, domain containing. (1170 aa)
LOC103148202Transcription elongation factor A (SII), 2. (319 aa)
rps27aRibosomal protein S27a. (156 aa)
ENSPFOP00000012455General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (468 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (118 aa)
ENSPFOP00000011212Cullin 4A; Belongs to the cullin family. (770 aa)
tceanc2Uncharacterized protein. (207 aa)
LOC103133241ISY1 splicing factor homolog. (173 aa)
uvssaUV-stimulated scaffold protein A. (747 aa)
ENSPFOP00000009506Transcription elongation factor A (SII), 3. (540 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1110 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1907 aa)
xpaXeroderma pigmentosum, complementation group A. (275 aa)
ercc6Excision repair cross-complementation group 6. (1449 aa)
LOC103155672General transcription factor IIH, polypeptide 2. (255 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
tcea1Transcription elongation factor A (SII), 1. (311 aa)
cops2COP9 signalosome subunit 2. (443 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC103131621COP9 signalosome subunit 8. (123 aa)
LOC103132215Ubiquitin-like domain-containing protein. (331 aa)
mnat1MNAT1 component of CDK activating kinase. (308 aa)
ENSPFOP00000004033Protein phosphatase 1, regulatory subunit 42. (266 aa)
cops5COP9 signalosome subunit 5. (334 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (317 aa)
ENSPFOP00000003124Damage-specific DNA binding protein 1. (1141 aa)
ENSPFOP00000002819Cyclin H; Belongs to the cyclin family. (334 aa)
ENSPFOP00000002792Cyclin H; Belongs to the cyclin family. (321 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
ENSPFOP00000002509Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (302 aa)
COPS6-2COP9 signalosome subunit 6. (275 aa)
COPS6COP9 signalosome subunit 6. (316 aa)
LOC103151004COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
xab2XPA binding protein 2. (853 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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