STRINGSTRING
ENSPFOP00000001063 ENSPFOP00000001063 ints6l ints6l pcf11 pcf11 taf8 taf8 ccnt2 ccnt2 polr2f polr2f ENSPFOP00000000089 ENSPFOP00000000089 gtf2a2 gtf2a2 pou2f2 pou2f2 ints6 ints6 tmem240 tmem240 LOC103134114 LOC103134114 ENSPFOP00000030966 ENSPFOP00000030966 LOC103130411 LOC103130411 polr2c polr2c ENSPFOP00000027035 ENSPFOP00000027035 polr2h polr2h snapc5 snapc5 ENSPFOP00000023797 ENSPFOP00000023797 taf13 taf13 ints7 ints7 supt4h1 supt4h1 ENSPFOP00000018341 ENSPFOP00000018341 ssu72 ssu72 cdk7 cdk7 ENSPFOP00000017386 ENSPFOP00000017386 LOC103135991 LOC103135991 ENSPFOP00000017251 ENSPFOP00000017251 gtf2b gtf2b polr2b polr2b pou2f3 pou2f3 polr2i polr2i LOC103155270 LOC103155270 LOC103129615 LOC103129615 gtf2e2 gtf2e2 ints13 ints13 ccnq ccnq LOC103138163 LOC103138163 LOC103138161 LOC103138161 LOC103138867 LOC103138867 ENSPFOP00000009990 ENSPFOP00000009990 ENSPFOP00000010194 ENSPFOP00000010194 ell2 ell2 ENSPFOP00000010387 ENSPFOP00000010387 LOC103147757 LOC103147757 ENSPFOP00000010827 ENSPFOP00000010827 gtf2f1 gtf2f1 ENSPFOP00000011510 ENSPFOP00000011510 pou6f1 pou6f1 snapc3 snapc3 polr2j polr2j snapc2 snapc2 ccdc66 ccdc66 taf5l taf5l tmtc4 tmtc4 ENSPFOP00000012308 ENSPFOP00000012308 ints12 ints12 ints1 ints1 LOC103148213 LOC103148213 ENSPFOP00000013637 ENSPFOP00000013637 pou6f2 pou6f2 rprd1b rprd1b ints2 ints2 ENSPFOP00000014516 ENSPFOP00000014516 ENSPFOP00000014830 ENSPFOP00000014830 ENSPFOP00000014865 ENSPFOP00000014865 ENSPFOP00000014955 ENSPFOP00000014955 tmtc3 tmtc3 ENSPFOP00000015203 ENSPFOP00000015203 LOC103141413 LOC103141413 gtf2f2 gtf2f2 ENSPFOP00000009699 ENSPFOP00000009699 znf143 znf143 taf11 taf11 polr2d polr2d ints11 ints11 LOC103145653 LOC103145653 rprd2 rprd2 ENSPFOP00000008518 ENSPFOP00000008518 polr2a polr2a ENSPFOP00000007709 ENSPFOP00000007709 sp1 sp1 ints14 ints14 ENSPFOP00000006683 ENSPFOP00000006683 LOC103147853 LOC103147853 tmtc2 tmtc2 taf5 taf5 srrt srrt POLR2E POLR2E cdk9 cdk9 pou1f1 pou1f1 polr2l polr2l NCBP1 NCBP1 ENSPFOP00000004097 ENSPFOP00000004097 ice2 ice2 ENSPFOP00000003873 ENSPFOP00000003873 CCNK CCNK ENSPFOP00000002806 ENSPFOP00000002806 ints8 ints8 ENSPFOP00000001874 ENSPFOP00000001874 ell ell ints10 ints10 gtf2a1 gtf2a1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPFOP00000001063Uncharacterized protein. (294 aa)
ints6lIntegrator complex subunit 6 like. (888 aa)
pcf11PCF11 cleavage and polyadenylation factor subunit. (1625 aa)
taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (306 aa)
ccnt2Cyclin T2; Belongs to the cyclin family. (692 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSPFOP00000000089POU domain protein. (708 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
pou2f2POU domain protein. (758 aa)
ints6Integrator complex subunit 6. (870 aa)
tmem240Transmembrane protein 240a. (175 aa)
LOC103134114Zinc finger CCCH-type containing 6. (1138 aa)
ENSPFOP00000030966Polymerase (RNA) II (DNA directed) polypeptide G-like. (109 aa)
LOC103130411Uncharacterized protein. (172 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
ENSPFOP00000027035Uncharacterized protein. (138 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
snapc5Small nuclear RNA activating complex, polypeptide 5. (118 aa)
ENSPFOP00000023797Integrator complex subunit 4. (984 aa)
taf13TATA-box binding protein associated factor 13. (125 aa)
ints7Integrator complex subunit 7. (960 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
ENSPFOP00000018341Uncharacterized protein. (194 aa)
ssu72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (360 aa)
ENSPFOP00000017386RNA polymerase II associated protein 2. (590 aa)
LOC103135991Uncharacterized protein. (599 aa)
ENSPFOP00000017251Zinc finger CCCH-type containing 4. (1322 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
pou2f3POU domain protein. (396 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC103155270Uncharacterized protein. (627 aa)
LOC103129615Uncharacterized protein. (816 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
ints13Integrator complex subunit 13. (701 aa)
ccnqCyclin Q; Belongs to the cyclin family. (252 aa)
LOC103138163Nucleic acid binding protein 1a. (221 aa)
LOC103138161Nucleic acid binding protein 1a. (221 aa)
LOC103138867Transmembrane O-mannosyltransferase targeting cadherins 2b. (835 aa)
ENSPFOP00000009990Integrator complex subunit 3. (1037 aa)
ENSPFOP00000010194Integrator complex subunit 5. (949 aa)
ell2Elongation factor, RNA polymerase II, 2. (672 aa)
ENSPFOP00000010387Uncharacterized protein. (1165 aa)
LOC103147757Uncharacterized protein. (363 aa)
ENSPFOP00000010827TBP-like 1. (126 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
ENSPFOP00000011510Transcription elongation factor SPT5. (1004 aa)
pou6f1POU domain protein. (610 aa)
snapc3Small nuclear RNA activating complex, polypeptide 3. (380 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (118 aa)
snapc2Uncharacterized protein. (455 aa)
ccdc66CCDC66 domain-containing protein. (848 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (601 aa)
tmtc4Transmembrane O-mannosyltransferase targeting cadherins 4. (741 aa)
ENSPFOP00000012308Integrator complex subunit 9. (660 aa)
ints12Integrator complex subunit 12. (446 aa)
ints1Integrator complex subunit 1. (2186 aa)
LOC103148213Cyclin T1; Belongs to the cyclin family. (684 aa)
ENSPFOP00000013637Regulation of nuclear pre-mRNA domain containing 2b. (623 aa)
pou6f2POU domain protein. (666 aa)
rprd1bRegulation of nuclear pre-mRNA domain containing 1B. (328 aa)
ints2Integrator complex subunit 2. (1207 aa)
ENSPFOP00000014516Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (167 aa)
ENSPFOP00000014830TATA box binding protein. (315 aa)
ENSPFOP00000014865Uncharacterized protein. (54 aa)
ENSPFOP00000014955POU domain protein. (734 aa)
tmtc3TPR_REGION domain-containing protein. (937 aa)
ENSPFOP00000015203General transcription factor IIA, 1-like. (430 aa)
LOC103141413Cyclin T2b; Belongs to the cyclin family. (597 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (312 aa)
ENSPFOP00000009699Regulation of nuclear pre-mRNA domain containing 1A. (289 aa)
znf143Zinc finger protein 143b. (625 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (208 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
ints11Integrator complex subunit 11. (599 aa)
LOC103145653TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (637 aa)
rprd2Regulation of nuclear pre-mRNA domain containing 2a. (1082 aa)
ENSPFOP00000008518General transcription factor IIE, polypeptide 1, alpha. (463 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1907 aa)
ENSPFOP00000007709TFIIF_beta domain-containing protein. (140 aa)
sp1Sp1 transcription factor. (687 aa)
ints14Integrator complex subunit 14. (512 aa)
ENSPFOP00000006683Si:ch211-13k12.2. (540 aa)
LOC103147853Si:ch211-13k12.2. (602 aa)
tmtc2Transmembrane O-mannosyltransferase targeting cadherins 2a. (854 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (745 aa)
srrtSerrate RNA effector molecule homolog (Arabidopsis). (878 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (393 aa)
pou1f1POU domain protein. (374 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
NCBP1Nuclear cap binding protein subunit 1. (799 aa)
ENSPFOP00000004097Uncharacterized protein. (181 aa)
ice2Interactor of little elongator complex ELL subunit 2. (909 aa)
ENSPFOP00000003873WD_REPEATS_REGION domain-containing protein. (316 aa)
CCNKCyclin K; Belongs to the cyclin family. (562 aa)
ENSPFOP00000002806TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (252 aa)
ints8Integrator complex subunit 8. (991 aa)
ENSPFOP00000001874Phosphorylated adaptor for RNA export. (393 aa)
ellElongation factor RNA polymerase II. (645 aa)
ints10Integrator complex subunit 10. (714 aa)
gtf2a1General transcription factor IIA, 1. (393 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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