STRINGSTRING
ENSPFOP00000029203 ENSPFOP00000029203 polr2f polr2f ENSPFOP00000002792 ENSPFOP00000002792 ENSPFOP00000002819 ENSPFOP00000002819 rnmt rnmt mnat1 mnat1 NCBP1 NCBP1 polr2l polr2l POLR2E POLR2E LOC103155672 LOC103155672 ENSPFOP00000007709 ENSPFOP00000007709 polr2a polr2a polr2d polr2d LOC103147920 LOC103147920 gtf2f1 gtf2f1 ENSPFOP00000011510 ENSPFOP00000011510 polr2j polr2j ENSPFOP00000012455 ENSPFOP00000012455 ENSPFOP00000014865 ENSPFOP00000014865 ercc3 ercc3 gtf2f2 gtf2f2 polr2i polr2i polr2b polr2b ENSPFOP00000017193 ENSPFOP00000017193 cdk7 cdk7 ENSPFOP00000018214 ENSPFOP00000018214 rngtt rngtt spag7 spag7 ENSPFOP00000030966 ENSPFOP00000030966 gtf2h5 gtf2h5 gtf2h1 gtf2h1 polr2h polr2h polr2c polr2c
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSPFOP00000029203TYR_PHOSPHATASE_2 domain-containing protein. (281 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSPFOP00000002792Cyclin H; Belongs to the cyclin family. (321 aa)
ENSPFOP00000002819Cyclin H; Belongs to the cyclin family. (334 aa)
rnmtmRNA cap guanine-N7 methyltransferase. (394 aa)
mnat1MNAT1 component of CDK activating kinase. (308 aa)
NCBP1Nuclear cap binding protein subunit 1. (799 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
LOC103155672General transcription factor IIH, polypeptide 2. (255 aa)
ENSPFOP00000007709TFIIF_beta domain-containing protein. (140 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1907 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
LOC103147920TYR_PHOSPHATASE_2 domain-containing protein. (313 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
ENSPFOP00000011510Transcription elongation factor SPT5. (1004 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (118 aa)
ENSPFOP00000012455General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (468 aa)
ENSPFOP00000014865Uncharacterized protein. (54 aa)
ercc3Excision repair cross-complementation group 3. (780 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (312 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
ENSPFOP00000017193Excision repair cross-complementation group 2. (760 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (360 aa)
ENSPFOP00000018214General transcription factor IIH, polypeptide 3. (303 aa)
rngttPolynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (602 aa)
spag7Sperm-associated antigen 7 homolog. (229 aa)
ENSPFOP00000030966Polymerase (RNA) II (DNA directed) polypeptide G-like. (109 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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