STRINGSTRING
chtop chtop LOC103132121 LOC103132121 ENSPFOP00000000320 ENSPFOP00000000320 nup98 nup98 LOC103132132 LOC103132132 AAAS AAAS SRSF3 SRSF3 LOC103150096 LOC103150096 ENSPFOP00000001377 ENSPFOP00000001377 LOC103145252 LOC103145252 ENSPFOP00000001559 ENSPFOP00000001559 ENSPFOP00000001863 ENSPFOP00000001863 LOC103147715 LOC103147715 ENSPFOP00000003771 ENSPFOP00000003771 nup54 nup54 NCBP1 NCBP1 rae1 rae1 nup188 nup188 LOC103133037 LOC103133037 tpr tpr nup160 nup160 nxt2 nxt2 ranbp2 ranbp2 thoc3 thoc3 thoc6 thoc6 srsf7 srsf7 slu7 slu7 ENSPFOP00000009319 ENSPFOP00000009319 ENSPFOP00000009492 ENSPFOP00000009492 LOC103148541 LOC103148541 ENSPFOP00000009592 ENSPFOP00000009592 nup58 nup58 rnps1 rnps1 nup35 nup35 DDX39A DDX39A thoc7 thoc7 aaas aaas rbm8a rbm8a NUP214 NUP214 ndc1 ndc1 ENSPFOP00000010929 ENSPFOP00000010929 nup88 nup88 LOC103147203 LOC103147203 ENSPFOP00000011809 ENSPFOP00000011809 nup85 nup85 nup133 nup133 NUP62 NUP62 nup93 nup93 ENSPFOP00000013288 ENSPFOP00000013288 sarnp sarnp gle1 gle1 LOC103140298 LOC103140298 LOC103137288 LOC103137288 ENSPFOP00000014516 ENSPFOP00000014516 LOC103135787 LOC103135787 nup50 nup50 nup210 nup210 magoh magoh sec13 sec13 thoc5 thoc5 LOC103133395 LOC103133395 nup107 nup107 LOC103150199 LOC103150199 LOC103130447 LOC103130447 LOC103138330 LOC103138330 ENSPFOP00000018099 ENSPFOP00000018099 LOC103137614 LOC103137614 LOC103140933 LOC103140933 LOC103137354 LOC103137354 ENSPFOP00000019679 ENSPFOP00000019679 cdc40 cdc40 LOC103149198 LOC103149198 nup155 nup155 srsf2 srsf2 ENSPFOP00000022512 ENSPFOP00000022512 nup43 nup43 LOC103155406 LOC103155406 ENSPFOP00000025956 ENSPFOP00000025956 seh1l seh1l ENSPFOP00000027348 ENSPFOP00000027348 thoc1 thoc1 LOC103143640 LOC103143640 ENSPFOP00000028952 ENSPFOP00000028952
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
chtopChromatin target of PRMT1a. (245 aa)
LOC103132121Eukaryotic translation initiation factor 4eb; Belongs to the eukaryotic initiation factor 4E family. (236 aa)
ENSPFOP00000000320Cell division cycle 40 homolog (S. cerevisiae). (582 aa)
nup98Nucleoporin 98. (1820 aa)
LOC103132132Stem-loop binding protein. (270 aa)
AAASAladin WD repeat nucleoporin. (370 aa)
SRSF3Serine and arginine rich splicing factor 3. (125 aa)
LOC103150096Uncharacterized protein. (427 aa)
ENSPFOP00000001377POM121 transmembrane nucleoporin. (1138 aa)
LOC103145252Nucleoporin 42. (419 aa)
ENSPFOP00000001559DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1263 aa)
ENSPFOP00000001863RRM domain-containing protein. (269 aa)
LOC103147715Eukaryotic translation initiation factor 4E family member 1c; Belongs to the eukaryotic initiation factor 4E family. (210 aa)
ENSPFOP00000003771Serine/arginine repetitive matrix 1. (861 aa)
nup54Uncharacterized protein. (566 aa)
NCBP1Nuclear cap binding protein subunit 1. (799 aa)
rae1Ribonucleic acid export 1. (368 aa)
nup188Nucleoporin 188. (1749 aa)
LOC103133037UPF3B regulator of nonsense mediated mRNA decay. (453 aa)
tprTranslocated promoter region a, nuclear basket protein. (2481 aa)
nup160Nucleoporin 160. (1396 aa)
nxt2Nuclear transport factor 2-like export factor 2. (143 aa)
ranbp2RAN binding protein 2. (3082 aa)
thoc3THO complex 3. (349 aa)
thoc6THO complex 6. (323 aa)
srsf7Serine and arginine rich splicing factor 7b. (229 aa)
slu7SLU7 homolog, splicing factor. (565 aa)
ENSPFOP00000009319Zgc:153681. (625 aa)
ENSPFOP00000009492Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (416 aa)
LOC103148541Serine and arginine rich splicing factor 1a. (245 aa)
ENSPFOP00000009592Uncharacterized protein. (181 aa)
nup58Nucleoporin 58. (594 aa)
rnps1RNA binding protein S1, serine-rich domain. (280 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (296 aa)
DDX39ADExD-box helicase 39A. (427 aa)
thoc7THO complex 7. (203 aa)
aaasAchalasia, adrenocortical insufficiency, alacrimia. (518 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (175 aa)
NUP214Nucleoporin 214. (1694 aa)
ndc1NDC1 transmembrane nucleoporin. (669 aa)
ENSPFOP00000010929Nucleoporin 205. (2030 aa)
nup88Nucleoporin 88. (713 aa)
LOC103147203Uncharacterized protein. (228 aa)
ENSPFOP00000011809WD repeat domain 33. (739 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
nup133Nucleoporin 133. (1116 aa)
NUP62Nucleoporin 62. (553 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
ENSPFOP00000013288Nucleoporin 153. (1456 aa)
sarnpSAP domain containing ribonucleoprotein. (212 aa)
gle1GLE1 RNA export mediator. (747 aa)
LOC103140298U2 small nuclear RNA auxiliary factor 1. (230 aa)
LOC103137288Translocated promoter region b, nuclear basket protein. (2358 aa)
ENSPFOP00000014516Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (167 aa)
LOC103135787RRM domain-containing protein. (453 aa)
nup50Nucleoporin 50. (449 aa)
nup210Nucleoporin 210. (1880 aa)
magohMago homolog, exon junction complex subunit. (147 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
thoc5THO complex 5. (685 aa)
LOC103133395RRM domain-containing protein. (243 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (902 aa)
LOC103150199UPF3B regulator of nonsense mediated mRNA decay. (453 aa)
LOC103130447Serine and arginine rich splicing factor 5b. (301 aa)
LOC103138330Serine and arginine rich splicing factor 7a. (257 aa)
ENSPFOP00000018099Nucleoporin 37. (327 aa)
LOC103137614RRM domain-containing protein. (168 aa)
LOC103140933Uncharacterized protein. (279 aa)
LOC103137354Eukaryotic translation initiation factor 4ea; Belongs to the eukaryotic initiation factor 4E family. (215 aa)
ENSPFOP00000019679THO complex 2. (1548 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
LOC103149198Serine and arginine rich splicing factor 9. (251 aa)
nup155Nucleoporin 155. (1367 aa)
srsf2Serine and arginine rich splicing factor 2a. (238 aa)
ENSPFOP00000022512Serine/arginine repetitive matrix 1. (870 aa)
nup43Nucleoporin 43. (370 aa)
LOC103155406Stem-loop binding protein 2. (338 aa)
ENSPFOP00000025956Serine and arginine rich splicing factor 11. (463 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (383 aa)
ENSPFOP00000027348Casc3 exon junction complex subunit. (577 aa)
thoc1THO complex 1. (654 aa)
LOC103143640Polymerase (DNA-directed), delta interacting protein 3. (488 aa)
ENSPFOP00000028952Aly/REF export factor. (274 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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