STRINGSTRING
polr2l polr2l POLR2E POLR2E LOC103145803 LOC103145803 LOC103155672 LOC103155672 taf5 taf5 taf2 taf2 polr2a polr2a ENSPFOP00000007709 ENSPFOP00000007709 ENSPFOP00000008518 ENSPFOP00000008518 LOC103145653 LOC103145653 gtf2f2 gtf2f2 polr2d polr2d taf11 taf11 TAF4 TAF4 ENSPFOP00000010827 ENSPFOP00000010827 gtf2f1 gtf2f1 taf10 taf10 polr2j polr2j taf5l taf5l ENSPFOP00000012455 ENSPFOP00000012455 taf3 taf3 taf7 taf7 ENSPFOP00000014349 ENSPFOP00000014349 taf12 taf12 ENSPFOP00000014732 ENSPFOP00000014732 ENSPFOP00000017193 ENSPFOP00000017193 gtf2b gtf2b cdk7 cdk7 ENSPFOP00000030966 ENSPFOP00000030966 ENSPFOP00000018214 ENSPFOP00000018214 ercc3 ercc3 gtf2h5 gtf2h5 taf13 taf13 gtf2h1 gtf2h1 polr2h polr2h ENSPFOP00000027035 ENSPFOP00000027035 polr2c polr2c ENSPFOP00000014865 ENSPFOP00000014865 ENSPFOP00000015203 ENSPFOP00000015203 ENSPFOP00000014830 ENSPFOP00000014830 gtf2e2 gtf2e2 polr2i polr2i polr2b polr2b gtf2a2 gtf2a2 polr2f polr2f LOC103130849 LOC103130849 ENSPFOP00000001063 ENSPFOP00000001063 gtf2a1 gtf2a1 ENSPFOP00000002792 ENSPFOP00000002792 ENSPFOP00000002806 ENSPFOP00000002806 ENSPFOP00000002819 ENSPFOP00000002819 ENSPFOP00000003440 ENSPFOP00000003440 ENSPFOP00000003873 ENSPFOP00000003873 mnat1 mnat1 ENSPFOP00000004097 ENSPFOP00000004097
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
LOC103145803TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (850 aa)
LOC103155672General transcription factor IIH, polypeptide 2. (255 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (745 aa)
taf2TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1219 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1907 aa)
ENSPFOP00000007709TFIIF_beta domain-containing protein. (140 aa)
ENSPFOP00000008518General transcription factor IIE, polypeptide 1, alpha. (463 aa)
LOC103145653TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (637 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (312 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (208 aa)
TAF4TATA-box binding protein associated factor 4. (856 aa)
ENSPFOP00000010827TBP-like 1. (126 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
taf10TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (118 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (601 aa)
ENSPFOP00000012455General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (468 aa)
taf3TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (942 aa)
taf7TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (362 aa)
ENSPFOP00000014349TAFH domain-containing protein. (953 aa)
taf12TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (131 aa)
ENSPFOP00000014732TAFH domain-containing protein. (1080 aa)
ENSPFOP00000017193Excision repair cross-complementation group 2. (760 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (360 aa)
ENSPFOP00000030966Polymerase (RNA) II (DNA directed) polypeptide G-like. (109 aa)
ENSPFOP00000018214General transcription factor IIH, polypeptide 3. (303 aa)
ercc3Excision repair cross-complementation group 3. (780 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
taf13TATA-box binding protein associated factor 13. (125 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSPFOP00000027035Uncharacterized protein. (138 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
ENSPFOP00000014865Uncharacterized protein. (54 aa)
ENSPFOP00000015203General transcription factor IIA, 1-like. (430 aa)
ENSPFOP00000014830TATA box binding protein. (315 aa)
gtf2e2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (287 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC103130849TAFH domain-containing protein. (921 aa)
ENSPFOP00000001063Uncharacterized protein. (294 aa)
gtf2a1General transcription factor IIA, 1. (393 aa)
ENSPFOP00000002792Cyclin H; Belongs to the cyclin family. (321 aa)
ENSPFOP00000002806TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (252 aa)
ENSPFOP00000002819Cyclin H; Belongs to the cyclin family. (334 aa)
ENSPFOP00000003440TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1725 aa)
ENSPFOP00000003873WD_REPEATS_REGION domain-containing protein. (316 aa)
mnat1MNAT1 component of CDK activating kinase. (308 aa)
ENSPFOP00000004097Uncharacterized protein. (181 aa)
Your Current Organism:
Poecilia formosa
NCBI taxonomy Id: 48698
Other names: Amazon molly, Limia formosa, Mollienesia formosa, P. formosa
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